Scleropages formosus (Asian bonytongue): 108936641
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Entry
108936641 CDS
T04919
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108936641
03015 mRNA surveillance pathway
108936641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108936641
03041 Spliceosome [BR:
sfm03041
]
108936641
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108936641
Spliceosome [BR:
sfm03041
]
Complex C
Other components
EJC/TREX
108936641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108936641
NCBI-ProteinID:
XP_018611663
LinkDB
All DBs
Position
3:22713368..22721621
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AA seq
658 aa
AA seq
DB search
MAVAVRILQDQLEKAKESLKNVDENIRKLTGRDPNELRPGQARRLPIPGPPGGRGRGINL
LRRGFSDPSGGPPAKQRDIEGALLRLAGDQRARDVRHDSDADDDDDDQKPAVQSSVVATS
KERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESTVATEKEKRRLEIEKKLEVQ
AEQERKKAENERRELFEERRTKQSELKLLEHKVELAQLQEEWNDHNAKIIKFIRTKTKPH
IFYIPGKMCSATNKLFEESQKKMNAMFKERQEEFAEHLNRMAVRPRRQLMRDRNQGEMKN
EEFKKEREQGNPVRVEEEGEMETGASAETATEKTGDVSMVQSDGEDHHEPQIQEVGAKAD
EAEEMEMEEPVGSLEVKEAEDLHQDSADRMDTECQPRDEQVKATKGLQEDSRLTVEMAVR
RESAVEDGKEDKLEQPETFELESQDSSMVAQSTEKQHNAQETLEPSAVGSVESAELVEPA
ADLNVEPQVHDLTEQLQPESTAQPQPEVVQEMLFKERGDEDEVRPGSRPKERGKKRSKSS
SSSSSSSSSSGSSGSSSSGSSSESSSSSGSSGSSSSSSSSSRSRSHGREGHGKHKRHPSE
RERDRKKSGADKGGSQDARGSRKKSSERKSDRKPSAPDSSRSGRRASRNERDRKDKRR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgagaattttgcaggatcagctcgagaaagcaaaagaaagcttaaaa
aatgtcgatgaaaacattcgcaaattaacgggaagagaccccaatgagcttagacctggc
caagcacggcggctgcccatcccaggaccacctggtggtcgaggaagaggaattaatttg
ttgcggcgtggtttttcagatcccagtgggggacctccggctaaacagagggatattgaa
ggagccctcctgaggttggctggagatcagagagcacgtgatgttcgtcatgacagtgat
gctgatgatgacgatgatgaccagaagcctgcggtacagtcctctgttgttgccacctcc
aaagagcgaacacgtcgagatcttattcaggatcagaccatggatgagaaggggaagcaa
agaaatcgacgcatgttcggcctgttgatgggaacccttcagaaattcaaacaggaatct
acagtagctacagagaaggaaaaaaggcgtttagaaatagagaaaaagctggaggtacaa
gcagagcaagagcggaaaaaagctgagaatgagagacgagagctctttgaggaaaggcgt
acaaagcagtcagagcttaaacttctggaacacaaagtggagcttgctcagctgcaagag
gaatggaacgaccacaatgctaaaatcataaaattcatccgcacaaaaacgaagccccat
attttctacattcctggaaagatgtgctctgccaccaacaagctgtttgaggagtcacag
aaaaagatgaatgctatgtttaaagagagacaagaagagtttgctgagcatttaaacagg
atggctgtacgaccccggcgccagcttatgagggacagaaatcaaggggagatgaagaac
gaagagtttaagaaagagcgtgagcaaggtaatccggttagggtggaggaggaaggagag
atggagacaggggcatctgccgaaacagcaacagaaaaaactggagacgtgagcatggta
cagagtgatggagaagatcatcatgagcctcagatacaggaagtgggtgctaaagcagat
gaggcagaagaaatggagatggaagagcctgtagggtcactggaagttaaggaagcagag
gacctgcatcaggatagtgcagaccgtatggatactgagtgtcagccaagagatgagcag
gtaaaggctacgaaggggcttcaggaggacagtcgacttacagtagagatggcggtacgt
cgtgagagtgcagtagaggatggaaaggaagacaaattggagcaacctgagacctttgag
ttggaaagtcaggatagtagcatggtggcccagtctactgagaaacaacataatgcacag
gagacattggagccatcagcagtaggttcagtggaaagtgcagaattggtagagcctgct
gctgacctcaatgtggagcctcaagtccatgatctcacagagcaactccaacctgagtct
acagcccagccgcagccagaggtagtacaggaaatgttgttcaaggagcgtggggatgaa
gatgaggtaagacctggctccagacccaaggagaggggcaagaagaggagcaaaagcagc
agcagtagcagcagcagcagcagttcatctggctccagtggctcatcctccagcggttca
tctagtgaaagcagctcatctagcgggagctctggcagctccagcagctccagctccagc
agtcgaagccgcagtcatggccgggaaggccacggaaagcacaagaggcacccctcagag
agggagcgggatcgcaagaagagcggagctgacaaaggtggtagccaggatgccaggggg
tccagaaagaagagctctgagaggaagtctgacaggaagccatctgctccagacagtagt
cgatcaggccgaagagcctcccgaaacgagagagaccgtaaagacaagcgccgttaa
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