Scleropages formosus (Asian bonytongue): 108939631
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Entry
108939631 CDS
T04919
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108939631 (jmjd1c)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
108939631 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
108939631
NCBI-ProteinID:
XP_029104444
LinkDB
All DBs
Position
24:17001385..17087511
Genome browser
AA seq
2518 aa
AA seq
DB search
MAVEARPEMVGKRFLCVSGEEPPELAEIGRWRWRAGVIRAVSHRSNEDRDLTVYVEFDDL
EWDKREWVKVYEDFQIFLLEHQLVWAKRKDSAQPQGTKSKPIQWPALAFKPLVGKAVLGS
IVAVEFFSNRQLDFLTDDGAYQAYQDEVDSLNPVLRDNPQLHEEVKAWVKDQKVQEIFMQ
GPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRTMIVMNDQVLEPQNVDPSMVQMTFLD
DVVHSLLKGENIGITSRRRSRSSQNSNTAHQTAGGRPTGTTGSSQGHYTRAQANSPRPVM
NSSGPAPKQATQLQQPLAQQQPPAHQQHQQPLQHQQSPSQQRGSRSGRRKGSDSSVPDDE
KPKEDKLDNGTKGDYSKSKGKPMVNKRRKPEDEEKKSGSKRLKADNISDFSESSDSENSN
KRAIDSCSEQSSENELKAKGPSKASEDEKPLRAKGCSDEPTLMDRLSPWEETQGNEKTSN
ADVAPPGDPAKPPSPCAPEAQGCIVEVKSTVKTLPKEHYGTTSPRTETPKCMIDITEAGG
VRPEAHSALLGSQKPETRHLALNPPASECRKPESEQQMARSLGSKIEFAHSEVIKPITSV
SESAAVAEREKVQQYLSIVPCMKNASAAEDARKSHKLSPSPDVLKLRANSSPETLKPKCN
PSPDVAKSKIQCVPETTKPKPNASPEVSKHKVRYQEGPSSGASRSASKADLDAPRSSFKP
VPARGAPAEPTKSPLIIDKNEHFTIYRDPALVRPEAEANHLAYLHQHLHPLHSSSHGSCL
TASTHHPPHLLPGSPMNAVHHPHLLSGVLPGLSPASLLGSHPRLDSGHPLAMAHHHPHLP
QQPPPPLLAQTHASASYNQLGLYPIIWQYPNGTHSYPGLGLPSSKWVHPDNAVSSEASLR
RNTPSPWLQHTPVTSTDSLGLLSHVPVRPASADPHRPIKVNTHASPPLSKAAGELHKEEL
EKKVFIDPIRTITTHLKQEQECNRTPTSKDGPLHRLFVDPLSSKPQRMATDAGDRSSKYK
EENRRILQESIEVAPFTAKIRSGEAERDHYSRIQSMPVPAPKSHALQTDKEAELYKFKHS
VPQSAPQSNYFTTLFNSVVNEPPRLYPSKDLNSYFEKASSSSSPLTMAPFNSKSLSKPPP
LIKHQPEGEGLAGKITEQLSQQVAMHPLSVSTTDRRSPAISPSNPLRCMPALHRAPVFHP
PTQQTLDRKDGSCGRLSPPTLTPIQPVSSAGKVSEQQKPPTLLPEMRDVGAVCKSTSEMT
PAEAWKTGDSQGKEKTGWSLVKGSGKPQAAMASVIVRPSTCIKYDCVPGPKTAAKEMVTE
RSFAGKNQTDCLKLAEAREPGRVILPNNLEDVCSEYKKNFVRPSQGSFPSCVAGSNTTKA
DAAAAPPAAASIFSPRADSQAPTPRTENVGPKGRIHEPAELQDGRSKTTSPNSAPNDGSR
TTGSAPLADGCQAFSGNFVHLKKHKAALAAARSRSSNNSSGGLEATPCPTAAPQDSTVPG
NTLNKTSSLVNGQPAQLSQPNYHKLKKAWLYRHSEEDRNTNEAEKPGATMAEIIKPCTVS
LVASTSTEVDIGKDNRGQLEDRTSQEDRKTRRGTKRSYESGSESGDDSDGSESKSEQRSK
RQPKPTYKKKQNDMQKKKGDSERDEDEVKPNGIFRSAREKTKLKLASSNGIPRSVLKDWR
KVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSRKGEEPAHSPVFCRFYHFRRLSYS
KNGVIRIDGFSSPDQYDDEAISLWVPDMYEDSELDLETSKYILSYIGDKFCQLVKTENNA
ASWIKKDAKMAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSKDK
ELYAWLKCVKGQPHDHKHLMPTQIIPGTVLTDLVNTMHVLREKYGIKAHCTCVGKHNSLL
TKLPSTNGVSQVLQNVLNHSNKISLCKPDTFQNPSQKVEANGGDSPSSNTSADGKPSPPE
SQSPLHFLADLAEQKSREEKKENKESPLGKALKEEKEHSESLESLHCRSSTMVSNCTEQG
STLRDLLTTTAGKLRLGSTDAGIAFAPVYSTASQTGKSGRSMPNILDDIIASVVENKIPA
SRSAKQGLKEEVGEEARGDRKKPGAGEPTRSHADIPHTWLYERRLLWLKDHRNANNWKLF
RECWRQGQPVLVSGVHKKLNSNLWKAESFNQEFADHQGDLLNCKDGVVSNSGIKEFWDGF
EDLTKRPKSKDGDTVVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASH
LPTFFVRPDLGPRLCCAYGVAASQEQDFGTANLHLEVSDIMSVLVYVGVAKGNGVLSKTG
VLKRLEEEDLDENLKKRLKDSSETPGALWHIYGSKDVEKIKEFLYKVAKEQGVEVPPEQD
PIREPGWYLNRKLRQRLLEEQGVQGWTVVQFLGDSILIPAGALHQVQNLHSCVQVINDFV
SPEHVVHSFHLTQELRSSKEDINYEDKLQVKNIFYHCVKNAVGTLKRCCAEELDEENS
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaagcgcgcccggagatggtcgggaagcgcttcctctgcgtgagcggagag
gagccgccggagctcgcggagatcgggcgctggcggtggcgcgccggcgtcatccgcgcg
gtctcccaccgcagcaacgaggacagggaccttacggtgtacgtggagtttgatgacctg
gagtgggataagcgtgagtgggttaaggtgtacgaggatttccagatcttcctgttggag
caccagctcgtttgggccaagcggaaggacagtgctcagcctcagggaacaaagagcaag
ccaatccagtggccggccctggcgttcaagcccctggtgggaaaggcggtcctgggctcc
atcgtggctgtggagttcttctctaacaggcagctggatttcctgacagatgatggcgcg
tatcaggcgtatcaggatgaagtggacagcttaaatccagttctcagggacaatccacag
cttcatgaagaagtgaaagcctgggttaaagatcaaaaggttcaggaaatttttatgcaa
ggtccctattcattaaatggctatagagtacgagtttataggcaagactctgcgactcag
tggttcacgggcatcatcacccatcacgacctcttcagccgcactatgattgtcatgaat
gaccaggtactagagcctcagaatgttgatccatctatggtacagatgacctttttagat
gatgtcgtccactctttgctgaaaggtgaaaacattggcattacgtccagacgcaggtct
cgctccagccagaacagcaacactgcccatcagaccgcgggagggagaccaaccggcacc
acaggaagctctcagggtcactacacacgtgcccaggccaacagtccccgccccgtgatg
aactcatcgggcccagcacccaagcaggccacacagctacagcagcccctggctcagcag
cagcccccggcccaccagcagcaccagcagcccctacagcaccagcagtcccccagccag
cagcgtggctcccgttcaggccgccggaagggctctgacagcagtgtaccagacgatgaa
aagcccaaggaggacaagctggacaatggcacaaagggagactactccaagagtaaaggc
aagcccatggtgaataaaagaaggaaacctgaggacgaggagaagaaatcgggttcaaaa
agactgaaggcagacaacatctctgacttttccgagagcagtgactctgaaaactctaat
aagagagccattgactcttgctcagagcagagttcagagaatgagctgaaagccaagggt
ccatcaaaggccagtgaggatgagaaacctctgcgggccaaaggatgcagcgatgaaccg
actctgatggatcggctgtctccctgggaggaaacacaggggaatgaaaaaaccagcaat
gctgatgtagctcctccaggggatcctgccaagcctcccagcccctgtgctccagaggca
cagggctgcattgtggaggtgaaaagcactgtgaaaacactacctaaggagcactatggc
accacttcacccaggactgagacgcccaagtgcatgattgacatcacagaggcgggtggt
gttcggccggaggcgcactctgccttgctggggtcacagaaacctgagaccaggcattta
gccctgaacccgccagcctcggaatgcaggaagccagagagcgagcagcagatggctcgc
agccttggcagcaaaattgagtttgcccattcagaagtcataaagccgatcacatctgtc
agtgagtctgcagcggtagccgagcgggagaaggtccagcagtacttgtctatcgtgccg
tgcatgaagaatgcctctgctgctgaagatgcaaggaagtcccataagctgagcccctct
ccagatgtcctgaaactcagagcaaactcttccccagaaacattgaagcccaagtgcaat
ccttcccctgatgtcgccaagtcgaaaattcagtgcgtgcctgagacgacaaaacctaaa
ccaaatgcatctcccgaggtgtctaagcacaaagtgaggtaccaagaaggtccatcttct
ggtgctagccgttctgcatccaaagcagacttggatgcaccacgttccagcttcaagcct
gtccctgctagaggggcccctgccgaacccaccaaaagccccctgatcattgacaaaaat
gagcatttcaccatttatagggatccggcccttgtccgcccggaggcagaggccaaccac
cttgcctatctgcaccagcacctccacccactccatagttcctcccacggctcctgtctg
acagccagcacccatcatcccccacacctgcttcctggatccccgatgaatgctgtgcac
cacccccacttgctctctggtgtactccctgggctctccccggcttcactgctggggagt
caccccagactggactctggccaccccttggccatggcgcatcatcacccacatctgccg
cagcagcctccaccaccgttgctagcgcagacacatgccagtgcctcctacaaccagctg
ggcctctaccccatcatctggcagtaccccaatggcactcattcgtaccctggactgggc
ctgccttcctccaagtgggtgcacccagacaatgctgtgagctcagaggccagcttgagg
aggaacactccaagcccctggcttcaacacaccccggtgacctccacggacagcctgggc
ctgctaagccacgtcccggtgcggccggccagtgccgatcctcatcggcccatcaaggtc
aacacccatgctagcccacccctgtccaaagctgccggggagctccacaaggaggagttg
gagaaaaaagtgtttattgatccaatacgaacaatcacaacgcatttgaagcaggagcag
gagtgcaacagaaccccaacgagcaaagatggccccctgcatcgtctatttgtggaccct
ctatccagtaagccgcagcgaatggccacagatgctggcgaccgctccagcaagtacaaa
gaggagaaccgacgtatcctgcaggagagcatcgaagtggcacccttcacagccaagatt
cggtctggtgaggcggagcgcgaccactactcccgaatccagtccatgcctgtgccagca
cccaagagccatgcccttcagacagacaaggaggcggagctgtacaagttcaaacactct
gtgccacagagcgcaccccagagcaactacttcactacgctgttcaacagcgtggtcaat
gagcccccgcggctgtatccctccaaggacctcaactcgtacttcgagaaggccagcagc
agcagcagccctctgaccatggcaccattcaacagcaagtccctgtccaagccccctccg
ctgatcaagcaccagcctgagggggagggcctggcaggcaagatcacagagcagctctct
cagcaggttgctatgcaccccttgagcgtatccaccactgatcggaggagccctgctatc
tccccctcgaacccacttcgctgcatgccagcacttcaccgggcacctgtcttccaccct
ccaacccagcagactctggaccgcaaggatggcagctgtggacggctttctccgcccacg
ctcacaccaattcagcccgtcagctctgccgggaaggtgtccgagcagcagaagccccca
acgttgcttcctgagatgcgggatgttggtgctgtctgcaagagcacctcagagatgact
ccagcagaggcctggaagactggggattctcaaggcaaggagaagactggctggtccttg
gtgaaaggcagtgggaagccacaggcagctatggcgtctgttattgtacgcccatctacg
tgcataaaatatgactgtgtgccaggtcctaaaacggcagccaaggaaatggtcacggag
cgatcgtttgcaggcaagaaccagacagactgcctcaaactggctgaggccagggagcct
gggcgggtgatcctgccaaacaacctagaggacgtttgctctgagtacaagaagaacttt
gtgaggccatcccagggaagctttcccagctgcgtggcaggatccaacaccaccaaggcc
gacgctgctgctgcgcccccagctgctgccagcatctttagccccagagcagatagccaa
gctccaacacccaggacagagaatgtgggtcccaagggtagaatacatgagcctgcagag
ctgcaggatggcaggtcgaagaccacttcacccaattcagcaccgaacgatggctctcgg
accacaggcagtgctcctctagccgatgggtgccaggccttctctggcaactttgtccac
ctgaaaaagcacaaagcagcactggctgcagccagatccaggagcagcaacaacagcagt
ggtggcctggaggctacaccatgcccgacagctgccccacaagacagcaccgtgcccggc
aacacactaaacaaaacgagctccctggtgaatgggcagcctgcacagttgagccagccc
aactaccacaagctgaagaaggcctggctctacaggcactcagaggaagaccggaacact
aatgaggctgagaagcctggtgctaccatggctgaaatcatcaagccctgcactgtgagc
ctggttgcatccacatccactgaggtggatatcgggaaagataacagagggcagctggag
gaccgcacgtcacaggaagaccggaagacacgaagggggaccaaacgatcatacgaatcg
ggctcagagagtggcgacgactcagatggaagtgagagcaaatctgaacagaggtccaag
cggcagcccaagccaacatataagaaaaagcagaacgacatgcagaagaagaagggtgac
agtgaaagggatgaggacgaagtgaagcccaacggcatttttagaagcgccagggagaag
accaagctcaagctggcaagcagcaatgggatcccccgctctgtgctgaaggactggcgc
aaggtgaagaaactgaagcaaacaggcgagtccttcctgcaggacgactcatgctcggag
atcggtccaaacctgcagaaatgccgggagtgcagggtggttcgcagcaggaaaggcgag
gagcccgcccactcgcctgtcttctgccgcttctaccatttccgtcgtctctcctacagc
aaaaatggagtgatccggatagatggcttctcgtccccagatcagtatgatgacgaagcg
atcagcctctgggtaccggacatgtatgaggacagtgagcttgatctggagacctcaaag
tacattctgagctacattggggacaagttctgtcagctcgtcaagactgaaaataatgct
gcctcctggataaaaaaagatgccaagatggcgtggaagagggcagtgcgaggtgtgcgg
gagatgtgtgacgcatgcgaggccactcttttcaacattcactgggtgtgtcagaagtgt
ggcttcgttgtctgcctggactgctacaaagccaaggaaaggaaaagctctaaagacaaa
gagctgtatgcctggctgaagtgtgtcaagggacagccgcatgatcacaagcacctgatg
ccaacacagattattcctggaactgttctgactgacctggtgaacaccatgcacgtgctc
agggagaaatacggcatcaaggcgcactgcacgtgtgttgggaagcacaactcgctcctc
accaagttgccgtccaccaatggagtgtcacaggtactgcagaatgtcctcaaccatagc
aacaagatctccctgtgcaagccagatacctttcaaaatccatcccagaaagtggaggcc
aatggtggcgacagcccttccagcaacacaagcgcagacggcaagcccagtccgcccgaa
tctcagtccccgctgcacttcctggctgaccttgctgagcagaagtcccgagaggagaag
aaagaaaacaaggagtctcccctaggcaaggcgctgaaggaggagaaggaacacagtgaa
agccttgagagtctgcactgccgatcctctaccatggtttccaactgtacggaacagggc
tctactctgcgtgacctgctcactaccacggcgggaaagcttcgtctgggctctaccgat
gccggcattgccttcgctcccgtctactcaactgcctcgcagactggcaaaagtggccgt
agcatgcccaacatcctagatgacatcattgcctctgtggtggagaacaagatcccagct
agccgctcagccaagcagggcctgaaggaggaggtgggtgaagaggcccggggagatcgc
aagaagcctggtgctggagaacctacccggtctcatgctgacataccccacacttggtta
tatgagcgccggctgctctggctcaaggaccaccgcaatgccaacaactggaagctcttc
agagagtgctggagacaggggcagcctgttttggtgtcaggggtacacaagaagttgaac
agcaatttatggaaggcagaatcctttaaccaggaatttgcagaccatcaaggagacctt
ttaaactgcaaggatggtgtggtttccaactctggcatcaaggaattctgggatggcttt
gaggacttgaccaaacggccaaagtccaaagatggggacaccgtggtctataggctcaag
gattggccatcgggagaggagttcatggccctcatgccttcacggtatgacgacctcatg
aaaaatctcccccttcctgagtactcggaccctgaggggaacctcaacctggcctcccat
ctgcccacctttttcgtgcggccagacctaggcccacgtctgtgctgtgcatacggtgtt
gctgcctcccaagagcaagattttggaacagccaatcttcacctggaggtgtctgacatc
atgagtgtcctggtctatgtgggtgtagccaaaggaaatggagtcctctcaaaaacaggt
gtattgaagaggctggaggaagaggatctggatgaaaatctgaagaagagattgaaagac
tccagtgaaactccgggagccttgtggcacatctatgggagcaaagatgtggagaaaatt
aaagagttcctctacaaggttgccaaggagcagggcgttgaggtgccacctgagcaggac
ccaatacgcgagcctggatggtacctgaaccggaagctgcgtcagcggctgctggaggag
cagggtgtccagggctggacggtggttcagttcctaggcgattccattctcatccctgca
ggggcgctgcatcaggtgcagaacctccacagctgtgtccaggtgatcaatgactttgtc
tctccggaacacgtggtgcactcatttcatctaacgcaggaactgaggtcatccaaagaa
gatattaactatgaagataagctacaggtcaagaacatcttctatcactgtgtgaagaat
gcggtgggaacactgaagaggtgctgtgccgaggagctggatgaagagaactcatga
DBGET
integrated database retrieval system
