Scleropages formosus (Asian bonytongue): 108941420
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Entry
108941420 CDS
T04919
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108941420 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108941420 (arid1b)
03021 Transcription machinery [BR:
sfm03021
]
108941420 (arid1b)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108941420 (arid1b)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Helix-turn-helix
ARID
108941420 (arid1b)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108941420 (arid1b)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108941420 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108941420
NCBI-ProteinID:
XP_029114334
LinkDB
All DBs
Position
15:5867885..5983632
Genome browser
AA seq
2275 aa
AA seq
DB search
MAAQVASAPAATSGKNPALSGGLNQERSSAVQGSGPALRAADGTRSVNNVDHHHHHHHHH
HHHSEPSAANPRDKDGGNPAGSAPNPGVDTGLMANHKMRMIGGGDPAAPQQQPPPPPQHA
RLMPTNNTNSSLAPGPREREGEGDGRPHAGKDIALANQVEQQQQMLSKSEEEHRPCKPGE
RMGSGYEHELENSGPAGGARGNGAASDFSHHPPHAPHHPAHYYGSARAGPCFDKHGGQQN
PGVGIVDPALNSHDGFHNSQYNQYGGYRAAFGSGGYGVMSSSRQGGSNMAIAAGSSAAGN
LGKASMASASTSGGFQRFPGQSQHPTGATPTLNQLLTSPSPMMRGYGGGYQDYTPAAGQQ
QPGVGKDMGSQYASGVHGWGAQQRSHAALSPGHGGQGVSRAQVPPMDFMAMKRSQLYGMG
SSPFSQQQQQGSPYPSQPYGSPPPPHRYPMGMQARGQVGMAGMQYPQQQQMPPQYGQQGV
GGYCQQGQPSYFGQPQQPTAQAPPPYGHTRAPTQQESQQEIYGNRTTQAPLAPGQPEHEE
IGLIQQERPSSLPDLSGSIDDLPTGTEAGLSSAVSASGSSSSQGEQSNPAPSPFSPRASP
HLPSARGEPSPSPVASPVGSTQSRSGPISPASIPSTQMAPQTPGSVTDVASVSQERGFMA
SMQRNPPMPSQFGPQPPGQSMSPHPSPGAQMHHGMGSYPQSSASSSYGPQGVQYGPQGNY
PRPATYAGAPGANYSGPGHGMSNSLGLNSSSPMHGQGPGQPCVSVPMGRSPGPTMAGRPY
PSGLGSAAPSSPGMPQTTGPGMGPPAAGVNRKAQETVTNAMQATANSTQGRPPFARSPAY
LSQTGPGPWVTPPATPQPPHLGSPPLPSAMPQYEQYGQASYSGINQMGMIGASSPYSQPA
GSNSGMMTPQGPPYNMPPTGPMSGAGDGLMAADTKPKSDSKEETFLAAELPKAKDGYNAQ
CMSQPPTPGTMPVPSPLSPSPASLSSYHGDDSDSVSSPAWPKTPSSPKSNSSTMTGEKIS
RLYEMGSEPERKAWVDRYLSFMEERGTPVPTLPAVGKKPLDLCRLYMAVKEIGGLAMVNK
NKKWRELAGCLNVGTSSSSASSLKKQYIQYLFAFECKVERGEEPPPDAFAVADSKKQAKI
QPPSPANSGSLQGPQTPQSTGSSSVAEMPSDVKPPTPASTPHSQITPMQGARNSAISVQD
PFSEVSDPAFQKRNSLTPGGPYQQGTNMPDVMMQMQFEANKDPFAGMRKVVGASAEPFMP
AQIPSGSSMQEMYGRPPSNAMPGMSMAQRPQYPYGPGYDRRSDHVMGMEGSMGPPGSQGN
MVPSNSDPSMYSPNRYHAQQRHEGYGQQYPGMSYGAPPPGMFPQQQGYKRPMERMYGPPA
KRYEGDVYGIPYGSQQPEMHGQYGGGGGGYPGPERRPLQGQFPYSYGRERVSGTGPGGPP
QPPQHGMPPQMMGGSTEGPQPGMWPPRTDMPYSYANRQSQGGSPQVPPYPPMGRADEMEG
RPSQDGPWAGHGGQRQSSFLPSSSGSMPPMTTRPPASSYQTPPAMPNHVSRAPSPASFQR
SMEARMSPSKAAFMSSMKMPKAGMPMPSQQGSIPSGQGPPLMRREPHFPPGSVEGTQPVL
KPHRKMTSKDTGTPEAWRVMMSLRSGLLAESTWALDTINVLLYDDSTVGSFMLSQLPGFL
ELVVEYFRRCLIEIFGILKEYEVGTVGQKSLLAPVCGEKMEEPPTLESSCEGEEELEKLM
EDQPANQSDRALPGKEDVAPELSKEAAVEVMEAALEEELDGKVDSRSGKPVEQPPLDPPP
EPRPRQASRYDRLPVKVLKREDDFVEEQSEHLGQVQEFSSGLLHWQAGGGDSTAHIQLHF
ESRSELQSRRTPPACESGPDKQNGPVGEDAAAERSITATIDDVLCARPGSLQDGGSSLGV
HGASYPFRLEPAEGQRRITVLEDEPRTLDEAPLSTAASWQDSLGRRCICISNIVRSLSFV
PGNDVEMSRHPGLVLILGKLVLLHHEHPERKRPPQTYEREEQRDCERDRGLACSRDEWRW
DCLAQLRENTMVTLANIAGQLDLSLYPESICLPILDGLLHWMVCPSAQARDPFPAAGQHS
ALTPQGLVLECLCKLSVQDGNVDLLLATPPFSRQEKLFVTLVRYVGERKHQVYREMAVAV
LSNLAQGDPLVARAIALQRGSISSLVGFLEDGVTMAQYQQSQHNLLHVGHPSVEPPSVNM
MCRAAKALLAMAKVEENRPEFMLFESRLLDISISSVLNSAVAAIVCEVLFQIGHL
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtggcatcggctccggcggcgaccagcggtaaaaaccccgctctttcg
ggcggcttgaaccaggagcggagctccgccgtgcagggctctggacccgcgctcagggcg
gcggacgggactcgatccgtgaacaatgtagaccatcatcatcaccatcaccaccaccat
catcaccacagcgagccgagcgcggccaacccgcgagacaaggacggggggaacccggcc
ggttccgctccgaaccccggcgtggacacgggtctcatggcgaaccacaagatgaggatg
atcgggggaggagatcccgcagctccgcagcagcagccgccgccgccgccgcagcacgcg
cgtctcatgccaaccaacaacactaacagcagcctggctccgggtccgagggagagagag
ggggaaggggacggtcggccccatgcgggtaaggacatcgcgttggcaaaccaggtcgag
cagcagcagcagatgctgagcaaaagtgaggaggagcaccgtccgtgcaaaccgggcgag
cggatgggctccgggtacgagcacgagctcgagaactcggggccagcgggcggcgcgagg
ggcaacggcgcggcgtccgacttcagccaccatcctcctcatgctcctcaccatcctgct
cactactacggcagtgcccgagcagggccgtgctttgataaacatggcggacaacaaaac
cccggcgtgggcatcgtggatccggcgctcaactcccacgacggcttccacaacagccag
tacaaccagtacggcggctaccgggcggccttcggcagcggggggtacggcgtcatgagc
tcctcgaggcagggcgggagcaacatggcgatcgccgcggggagcagcgcggccggcaac
ctcgggaaagcctccatggcctccgcttccacgtccggggggtttcagaggttccccggg
cagagtcagcaccccaccggggcgacccccaccctgaaccagctgctcacctcccccagc
cccatgatgaggggctatggcggcggctaccaggactacacccccgcggcggggcagcaa
cagccgggggtgggcaaggacatgggctcccagtacgcgtccggcgtgcacggctggggg
gcgcaacaaaggagccacgccgcgctgagccccggacacggcggacagggcgtgagcaga
gcgcaggtgccccccatggacttcatggcgatgaagcgctcccagctctatgggatgggc
agcagccccttctcgcagcagcagcaacagggtagtccttaccccagccagccctacggg
tctccgccccctcctcatcgttacccaatgggcatgcaggcgaggggccaagtgggcatg
gccggcatgcagtaccctcagcaacagcagatgccccctcagtacggtcagcaaggagtg
ggcggatactgccagcaaggacagccctcatacttcggccaaccccaacagcccacggct
caagccccacccccttatggccacacccgtgccccgacccaacaggagagccaacaggag
atttatgggaatcggacaacccaagctcccttggcgcccgggcagcccgagcatgaggag
attggcttgatccaacaggagagaccatccagccttcctgacctctcgggctccatcgac
gacctgcccaccgggacggaggccgggctcagctcggcagtcagcgcgtcgggctcctcc
agtagccaaggcgagcagagcaacccggcgccatcgcccttctcgccccgcgcctccccg
cacctgcccagtgcacgtggcgagccttcgccctccccggtggcctctcccgtgggctct
acccagtcccgctccggcccaatctcccccgctagcatcccaagcacccagatggcgcca
cagacccccgggagtgtgacagatgtggcttctgtgtcccaggagagggggttcatggcg
agcatgcagcggaatccacccatgccctctcagttcgggccacagcctccagggcaatct
atgtcaccgcacccctccccgggggctcagatgcatcatgggatgggctcgtacccacag
agcagtgccagcagctcctacggaccgcagggggtgcagtatgggccccaaggtaactac
cccaggccagctacttatgcaggggcccccggtgccaactacagcgggccgggccacggg
atgagcaacagcctgggcctcaactccagtagcccaatgcacgggcagggccctgggcag
ccttgtgtctccgtacccatgggacgcagccccggtcccactatggctggccggccatac
cccagtggcctcggaagcgccgctcccagctctcccggcatgccccagaccacaggccct
ggaatggggccgcccgcagctggcgtcaaccgcaaagcccaggagacggttaccaatgcc
atgcaggccacggctaactcaacccagggcagacccccgtttgcaaggtcccccgcctac
ttgagccagactgggccagggccttgggtcacgcccccagccacgccccagcctcctcat
ctcggctcgccgccgctgccttccgcgatgccccagtacgaacagtacgggcaggccagc
tactccggcatcaaccaaatgggcatgattggggccagctcaccctacagccagccggcg
gggagcaactccggcatgatgacgccacagggtccgccgtacaacatgccgcctacaggg
ccaatgagtggcgctggcgatggtctgatggctgctgacacgaagcccaaatcggacagc
aaggaggaaacgtttctagctgcagagctccctaaagctaaggatggctacaacgctcag
tgtatgtcccagcctcccacccctggcaccatgcctgtcccctctccgctgtcccccagt
cctgctagcctctcctcgtaccacggcgacgacagcgatagcgttagcagccctgcctgg
cccaagactccatccagccctaagtctaactcgtccaccatgacgggcgagaagatcagc
aggctctacgagatgggctcggagccggagaggaaggcatgggtggaccgctatctgtca
ttcatggaggaacgaggcacgcccgtgcccacgctgcccgccgtgggcaaaaagcccctg
gacctgtgccggctttacatggctgtgaaggagatcgggggcttagccatggtgaacaag
aacaagaagtggagggagctggcaggttgcctcaacgtgggcacctcgagcagctcagca
agctccctcaagaagcagtacatccagtacctgtttgccttcgagtgcaaggtggagcgc
ggcgaagaacccccacctgacgcgttcgctgtcgccgacagcaagaagcaggccaagatt
cagccaccatctcctgccaactcggggtcccttcagggcccgcagaccccccagtccacc
gggagcagttcggtggctgagatgcccagtgatgtgaaacccccgacgccagcgtccacg
ccccacagccagatcacaccgatgcagggcgccaggaacagtgccatcagcgtgcaggac
cccttctcggaggtcagtgaccccgctttccagaagcgcaactctctgacccccgggggc
ccttaccagcagggcaccaatatgcccgacgtcatgatgcagatgcagttcgaggccaac
aaagaccctttcgccggcatgaggaaggtagtgggcgccagtgctgagcccttcatgcca
gcccagatacccagcggcagcagcatgcaggagatgtacggtcggcccccatccaacgcc
atgccggggatgagcatggcccaacgtccacagtacccctatggccccgggtacgacagg
aggtcagaccatgtgatgggcatggagggcagcatgggcccccctgggagtcagggcaac
atggtaccttccaacagcgaccccagcatgtactcccccaacaggtaccacgctcagcag
aggcacgagggatacgggcagcagtatcccggcatgtcctacggcgcccctccacccggg
atgttcccccagcagcagggttacaaacggccgatggagaggatgtacggccccccagcc
aagcgctatgagggcgacgtctacggcataccatacggcagccagcagcccgaaatgcac
ggccagtatggcggcggaggcggcggctacccggggcctgagagaaggccgctgcagggc
cagttcccctactcgtacggccgagagcgcgtgtctggtactggccctgggggcccaccg
cagcccccgcagcacggcatgccaccacagatgatgggtggctcgacggaggggccccag
cctggcatgtggccccccaggacagacatgccttactcttatgccaaccggcagagccag
ggcgggtccccccaggtgcccccttacccacccatgggccgtgcagacgaaatggagggc
cggcctagccaagatggcccgtgggcgggccatgggggtcagcgccagtcctccttcctt
ccctcctcatccggctccatgccccccatgaccaccagacccccggcctcctcctatcag
acccccccagccatgccaaatcacgtgtcccgagccccgagccccgcctccttccagcgc
tccatggaggcccgtatgtctcccagtaaagcagcctttatgtcctccatgaagatgccc
aaggcagggatgcccatgcccagccaacagggcagtatcccctctggccagggacccccg
ctcatgcgccgggagccccacttccctcccgggtcggtggagggcacccagcctgtcctc
aagccacaccgcaagatgacttccaaggacactggaacccccgaggcgtggcgcgtcatg
atgtcactcaggtcggggctgctggcagagagcacgtgggccctggacacaatcaatgtc
ctgctatacgatgacagcaccgtgggctccttcatgctctcccagttgcctggattcctg
gagctcgtggtggaatacttcagaaggtgcctgatcgagatcttcgggatcctcaaggag
tatgaggttggcactgtgggccagaagtccttgctggctcccgtctgtggcgagaagatg
gaagagccgccgaccttggagagcagttgcgagggcgaggaggagctggagaagttgatg
gaggatcagcctgcgaaccagtcggacagggctctgcccggtaaagaggacgtcgcacca
gagctgagtaaggaagctgcagtggaagtgatggaagccgctcttgaggaggagctggat
ggcaaggtggactccaggagtgggaaacccgtggaacagccccccctagaccctccacct
gagccgaggcccaggcaggccagcaggtacgacaggctccctgtgaaggtgctcaagagg
gaggatgactttgtggaggagcagtcggagcacctgggccaggtgcaggagttctccagt
gggctgctgcactggcaggctggtggcggcgactccacggcccatatccagttgcacttt
gagagcaggagcgaactgcagtcccgcaggacgccgccagcctgcgaaagtggccccgac
aagcagaacgggcccgtcggtgaggatgccgcggcagagaggagcatcacggctaccatc
gatgacgtgctgtgcgccaggccgggcagcctgcaggacggcggctcgtccctgggggtg
cacggcgcctcctaccctttccgcctggagccggcggagggccaacggcgcatcaccgtg
ctggaggatgagccgcgcaccctggacgaggcaccgctctccaccgctgccagttggcag
gattcgttgggccgccgctgtatttgcatctccaacatcgtgcgcagcctctcgttcgtg
ccgggcaacgatgttgagatgtcccggcacccgggcctggtgctgatcctgggcaaactg
gtgctgctgcaccatgaacaccccgagaggaagaggccgccgcagacctacgagcgggag
gagcagcgcgactgcgagcgcgaccgcggcttggcctgcagcagggacgaatggcgctgg
gattgcctggcccagctgcgggagaacaccatggtgacgctggccaacatcgctggacag
ctggacctgtcgctctacccagagagcatctgcctgcccatcctggatggcctgctgcac
tggatggtttgcccatcggcccaggcccgggacccgttccccgctgccggccagcactcc
gccctcactcctcaggggctggtgctggagtgcctgtgcaagctgagcgtccaggacggc
aacgtggacctgctgctggccacaccccctttcagtcgccaggagaagctctttgtcacg
ctggtgcgctacgtgggtgagcgcaagcaccaggtgtaccgggagatggcggtggccgtc
ctctcgaacctcgcgcagggggacccgctggtagcccgtgccatcgcccttcagaggggc
agcatcagcagcctggtgggcttcctggaggatggcgtcaccatggcgcagtaccagcag
agccagcacaacctgctgcacgtgggccacccgtccgtggagccgcccagcgtcaacatg
atgtgccgggccgcgaaggccctcttggccatggccaaggtggaggagaaccggcccgag
ttcatgctgttcgagagccggctgctggacatctccatctcgtccgtgctgaactcggct
gtggccgccatcgtgtgcgaagtactcttccagatcggccacttatga
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integrated database retrieval system
