Shewanella frigidimarina: Sfri_0602
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Entry
Sfri_0602 CDS
T00395
Name
(GenBank) transcriptional regulator, LuxR family protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_0602
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
Sfri_0602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_24
HTH_40
HTH_10
HTH_3
HTH_11
HTH_30
HTH_23
DUF2089
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABI70462
UniProt:
Q087V3
LinkDB
All DBs
Position
complement(701022..701654)
Genome browser
AA seq
210 aa
AA seq
DB search
MFSNNLLIVDFPVHLHGQFQNLANLIEFNLIPTNASCALSELSAASNSENGSAIMVHYLE
NPLQEIGYLSAELFKSDLHIAFCPALNVELEVILISSGFHGAISVDDSIAHQIQSIKQVQ
DGDISFNPKAVSKYILQRKRIPSSGNRAKILAVTTKKEQQVLSLILHGLTNEEMAKELNI
SVNTVKMHVQNIYKKTKIKNRGQLFAFAAG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaataaccttttaatcgtagatttccctgttcatcttcatgggcaatttcaa
aacctcgctaatttgattgaatttaacttaattccaaccaatgcgagctgcgcgttatca
gaattatcagccgcatcaaattccgaaaatggcagcgccattatggttcattatcttgaa
aatccattacaagaaattggttacttatctgcagagttatttaaaagcgacctgcacatt
gcattttgtcctgcactgaatgtagaactagaggttattcttatttcatctggatttcat
ggtgccatcagtgtcgatgactctatcgctcatcaaatacaaagcattaaacaagtgcaa
gatggcgacattagctttaaccctaaagccgtttctaaatacatcctccaaagaaagcgt
attccatcatcaggtaatcgcgccaaaatacttgccgtcaccacaaaaaaagaacaacaa
gtcttgtcactcatactgcatggattaaccaacgaagaaatggccaaagagctcaacatt
tctgttaataccgtcaaaatgcacgtacaaaatatttataaaaaaaccaaaattaaaaat
cgcggccaattatttgcttttgctgccggttaa
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