Shewanella frigidimarina: Sfri_1283
Help
Entry
Sfri_1283 CDS
T00395
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00540
Lipopolysaccharide biosynthesis
sfr01100
Metabolic pathways
Module
sfr_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sfri_1283
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Sfri_1283
Enzymes [BR:
sfr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
Sfri_1283
Lipopolysaccharide biosynthesis proteins [BR:
sfr01005
]
Lipid A
Sfri_1283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ABI71136
UniProt:
Q085C9
LinkDB
All DBs
Position
1517165..1518313
Genome browser
AA seq
382 aa
AA seq
DB search
MTNSPSKVFAIVAGEISGDILGAGLVNSLKKRYPDARFIGIGGPRMQALGFESLFPMEEL
SIMGLVEVLSHLPRLLHIRSSLVKQITELAPDCFIGIDAPDFNIGVELKLKAKGIKTVHY
VSPSVWAWRPKRIFKIAKATNMVLSLLPFEKAFYDQHQVPCTFVGHTLADDIPMHSDKLA
ARQLLGLDPNAEYLAVLPGSRGGELKQLAEPFVKAAQLVKQTFPDIKFVTPVVNDARRQQ
FLAALEEFAPDLEVTIVEGQSREVMAAADCILLASGTATLEAMLVKRPMVVSYRVSPITY
AIAIKMMKIKNYSLPNLLANDTIVPELMQANCQPQLIADAIIKQLNQDFAPLNTRFEELH
QLLKCNASERAADAVVALLQTP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccaactctccttcaaaagtattcgccattgtcgccggagaaatctccggcgatatt
ttaggtgccggtttagttaattcactcaaaaaacgctatcctgatgcgcgctttatcggc
attggtggccctcgaatgcaagctctagggtttgaaagtttatttccaatggaagaactg
tcgatcatgggcttagtcgaagtgttatcacatttacctcgactgctgcatattcgttca
agcctagtgaaacaaattactgaattagcgccagactgttttattggtattgatgcgccc
gattttaatattggtgtagagcttaaattaaaagccaaagggattaaaacagtccattac
gtcagcccgtcagtatgggcttggcgtccaaaacgtatatttaaaattgctaaagcgacc
aatatggtgttgtcgctattgccgtttgagaaagcgttttacgaccaacatcaagtgcct
tgtacttttgttgggcatacacttgcggacgatattccgatgcacagtgataagctagct
gctcggcaattattaggattagatcctaatgctgaatacttggcggtattgcctggttcc
agaggcggtgagctaaagcaattagctgagccgttcgtcaaagcagctcaattagttaag
caaacctttccagacatcaaatttgtcaccccagtggttaatgatgctcgtcgacaacag
tttcttgctgcacttgaggagtttgctcccgatttagaagtcactattgttgaaggccaa
tctcgcgaagtcatggctgctgctgattgtattttattggcatctggcacagcgacttta
gaggccatgctggttaaacgtcctatggttgtgtcgtatcgggtcagcccaattacgtat
gccatcgcgattaaaatgatgaaaatcaaaaactattcgttgcctaatttgctcgcaaac
gacaccattgtgccagaattgatgcaagctaattgccagccacagttaattgccgatgcg
ataatcaagcagcttaatcaagattttgcaccgctaaatacccgttttgaagaattacat
caattgctaaagtgtaatgccagcgagcgagcggcagatgctgtagtagcattattacaa
acgccgtaa
DBGET
integrated database retrieval system
