Shewanella frigidimarina: Sfri_1987
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Entry
Sfri_1987 CDS
T00395
Name
(GenBank) alpha/beta hydrolase fold
KO
K19707
sigma-B regulation protein RsbQ
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfr03021
]
Sfri_1987
Transcription machinery [BR:
sfr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sfri_1987
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Ndr
Motif
Other DBs
NCBI-ProteinID:
ABI71833
UniProt:
Q082I2
LinkDB
All DBs
Position
complement(2354543..2355349)
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AA seq
268 aa
AA seq
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MSHSNAVLVRNNVKLIGNGSKTLVLAHGFGCDQNMWRFVTPELMKHFTIVLFDYVGSGAS
DISQYSKKRYGQLEGYAEDIIEICDALHLSDAIFIGHSVSSIIGAIAAIQKPKLFSKLVM
VCPSPCFLNFPPDYFGGFDKEDLLELLNLMDKNYIGWANYLAPLVMGTTNSDELIGELSG
SFCSTDPVIAKSFAEATFLSDYRYLLKEITQPCLILQSENDALAATSVGEFIASEIAHSE
LNIIAAHGHCLHMTHPEAILKSIMKFAK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcaaatgctgttcttgttagaaataatgttaaattaatcggtaatggtagc
aaaaccttagttctcgcacatgggtttggttgcgatcaaaatatgtggcgttttgtaacc
ccagaactgatgaagcactttactattgttctatttgattatgttggttcaggtgcttcc
gatatctctcaatatagtaaaaaacgttatggtcaacttgaaggatatgcagaagacatc
atcgaaatatgtgatgctttacatttatctgacgccatttttataggacattccgttagt
agtatcattggtgctattgctgcaattcaaaaacctaagttattttctaagttggtaatg
gtgtgtccttcaccctgttttttaaatttccctcctgattactttggcggatttgataag
gaagacttactcgaattgttaaatctgatggacaaaaattatattggctgggcaaattat
ttagccccgttagtaatgggaacaaccaattcggatgaacttattggtgagttatcaggc
agcttttgttctaccgaccctgttatagcgaagagctttgctgaagcgacttttttatct
gattaccgttatctgctaaaagagattacacaaccgtgtttaattttacaaagtgaaaat
gatgccctggcagcaacatctgttggtgagtttattgctagcgaaatagcccatagtgaa
cttaacattatcgctgcccatggccattgtctgcatatgactcaccctgaagcaatctta
aaatcgataatgaaattcgctaaatga
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