Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4780
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Entry
SFyv_4780 CDS
T03315
Name
(GenBank) DNA-binding protein fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfs03000
]
SFyv_4780
03036 Chromosome and associated proteins [BR:
sfs03036
]
SFyv_4780
03400 DNA repair and recombination proteins [BR:
sfs03400
]
SFyv_4780
Transcription factors [BR:
sfs03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFyv_4780
Chromosome and associated proteins [BR:
sfs03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SFyv_4780
DNA repair and recombination proteins [BR:
sfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SFyv_4780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
Inhibitor_I24
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIL42549
LinkDB
All DBs
Position
3423045..3423341
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtaaattctgacgtactgaccgtttctaccgttaactctcaggat
caggtaacccaaaaacccctgcgtgactcggttaaacaggcactgaagaactattttgct
caactgaatggtcaggatgtgaatgacctctatgagctggtactggctgaagtagaacag
cccctgttggacatggtgatgcaatacacccgtggtaaccagacccgtgctgcgctgatg
atgggcatcaaccgtggtacgctgcgtaaaaaattgaaaaaatacggcatgaactaa
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