Shigella flexneri NCTC1 (serotype 2a): NCTC1_00130
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Entry
NCTC1_00130 CDS
T03751
Symbol
icaB
Name
(GenBank) putative xylanase/chitin deacetylase,Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase precursor,outer membrane N-deacetylase,poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB,Polysaccharide deacetylase
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
CDX05423
UniProt:
A0A9P2IV62
A0A0H2UX02
LinkDB
All DBs
Position
1:142664..143893
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AA seq
409 aa
AA seq
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MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTA
ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVG
SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA
NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMSRLVSNQPQG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacaagctgttattctcctgctgatgctgtttaccgcaagtgtcagtgccgcg
ttacctgcccgttatatgcaaaccatcgaaaatgctgcggtctgggcgcaaattagtgac
aagatggtgaccgtggggaatattcgggccggacaaatcattgccgtggagcccactgcc
gcaagttattacgcatttaattttggctttggtaaagggtttatcgataaagggcatctc
gagccagttcaggggcgacaaaaagttgaagacggtttgggtgacctcaacaagccgctg
agtaatcagaacttaattacctggaaagatacgccggtctacaacgcgccgagtgtgggc
agtgcgccatttggggtactggcggacaatttgcgctacccgattttgcataaactgaaa
gacaggttaaatcaaacctggtatcagatccgtattggcgatcgactggcctatatcagc
gcgctggatgcccaacccgataatggcctgccggtgctaacttatcaccatattctgcgc
gacgaagaaaacacccgttttcgccatacttcgacgaccacctcggtacgcgctttcaat
aaccaaatggcctggctgcgcgacaggggatacgcgacactgagcatggctcagctggaa
ggttacgtgaagaatacgatcaatctccctgcgcgagcggtggtgattacctttgatgat
ggcctcaagtcggtgagccgctatgcgtatcctgtgttgaaacaatatggcatgaaggcg
acggtgtttattgttacctcacgcatcaaacgtcacccgcagaagtggaacccaaaatcg
ctgcaatttatgagcgtttctgagcttaacgaaattcgcgatgtttttgatttccagtca
catacccattttttgcatcgggtagatggttatcgccgacccatattactgagccgtagt
gagcacaatattctgtttgattttgcacgttcacgccgcgctctggcgcaatttaatcca
catgtctggtatctttcgtatccgtttggcggctttaatgacaaagccgtgaaggcagca
aacgatgccggatttcacctggcggtgacaaccatgaaaggcaaagtaaaaccgggggat
aatccgttgttactaaaacgactttatatcttaagaacggattcgctggagaagatgtcg
cggctggtgagtaaccagccgcagggataa
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