Syntrophobacter fumaroxidans: Sfum_3592
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Entry
Sfum_3592 CDS
T00418
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
sfu
Syntrophobacter fumaroxidans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
AAA_5
HTH_8
PAS
PAS_4
PAS_8
AAA
AAA_2
AAA_16
bpMoxR
HTH_30
MCM
PAS_7
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABK19262
UniProt:
A0LPB0
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Position
complement(4402920..4404479)
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AA seq
519 aa
AA seq
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MPRKRPLKSMGRNFRPMKTVSPAMPWCSGERTFHGFSGMCVSRAAGLPARPGAIHGKETL
LGGENPVAQSAKQHILSPQTETILDSIADGVFTVDLDWRITSFNRAAEEITGVSASDAIG
RPCCEVFRANVCESTCVLKFTMETRKPIVNKSVAILRADGREIPISVSTALLKNASGHTI
GGVETFRDLSLVETLRKEIDRQYRFQDIVSKSPAMLELFAILPEVARSESTVLIQGESGT
GKELLSRAVHSLSSRAAGPFVAINCGALPDTLLESELFGHVAGAFTDARKNRAGRFAQAE
GGTLFLDEIGDVSPALQVRLLRVLEERTYEPLGSSRTVTANVRIVAASNRDLAQLVAEGS
FRKDLYYRINVVKLELPTLARRKEDIPLLAEHFIARLNKLRNKNILGLSHEALAVFMRHN
WPGNIRELENVIEYAFILCRGGLIQPAFLPEYLHAHACVLPDSGGLSLRDNEARAIRDAL
DRNQWRRMATARELGIDKNTLRRKMKRLNIRADDPRRDE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaagcggccgctgaaaagcatggggcgaaactttcggccgatgaaaaccgtc
tccccggcgatgccttggtgctcgggcgagaggacctttcacggtttttccggaatgtgc
gtgtcccgggccgccggcctgccggctcgaccgggcgcgatccatgggaaagagacgctc
ctcggaggggaaaatccagtggctcaatcggcaaaacagcacatcttgtccccgcagacg
gaaaccatcctcgacagtattgcggacggggttttcacggtggatctcgactggcggatc
acatcgtttaaccgggcggctgaagagatcacgggggtttcggcatcggacgccattgga
cggccgtgttgcgaagtctttcgagccaacgtctgcgagtccacttgtgtcttgaagttc
accatggaaaccaggaagcccatcgtcaacaaatctgttgcaatcctcagggccgacggc
agggaaatccccatcagcgtgagcacggctctgctcaagaacgcatcggggcacaccatc
ggcggagtggagacgtttcgggacctcagcctggtggaaacgttgcgaaaggaaatcgac
cgtcaatatcgtttccaggacattgtttccaagtccccagcaatgctggagctttttgcc
attctgccggaggtggcgcgaagtgagagcacggtgctcattcaaggcgagagcggcacc
ggcaaggaactgttgagccgcgcggtgcacagcttgagctcccgtgcggcgggtcctttc
gtggcgatcaattgcggcgcccttcccgatactctgctggaatccgagcttttcggacat
gtcgccggcgcattcacggatgccaggaagaaccgcgcgggccgtttcgcacaggcggaa
ggcggtacgctgttcctggatgaaatcggggacgtttcacccgctttgcaggtgagactg
ctgagagttctcgaagagcggacctacgagcccctcggttcctccagaacggtaacggcg
aacgttcggattgtcgccgcgtccaacagggacctggctcaactggtcgcggaaggatca
ttccgcaaagacctgtattaccgcatcaacgtggtcaagctggagctgccgacgcttgcc
cggcgcaaggaagacatcccgctgctcgcggagcatttcatcgcgcgcctcaacaagctg
cggaacaagaacatccttgggctgagtcacgaggctttggccgttttcatgcgtcacaac
tggcccggcaacattcgagaattggaaaacgtcatcgaatacgcgtttatactgtgccga
ggagggttgattcagccggccttccttccggaatacctgcacgctcacgcgtgcgttctt
cccgattcgggaggactgtcgctcagggacaacgaggcgcgcgccatcagggacgccctc
gatcgcaaccagtggcggcgcatggccaccgccagggaactggggatcgataagaacact
ctgcgccgcaaaatgaaacggctcaatatccgcgccgacgatccccgccgtgacgaatga
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