KEGG   Shigella flexneri 8401 (serotype 5b): SFV_0344Help
Entry
SFV_0344          CDS       T00377                                 

Gene name
ddlA
Definition
(GenBank) D-alanine-D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
sfv  Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00473  D-Alanine metabolism
sfv00550  Peptidoglycan biosynthesis
sfv01100  Metabolic pathways
sfv01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:sfv00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    SFV_0344 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SFV_0344 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    SFV_0344 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfv01011]
    SFV_0344 (ddlA)
Enzymes [BR:sfv01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     SFV_0344 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:sfv01011]
 Precursor biosynthesis
  Amino acid ligase
   SFV_0344 (ddlA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATPgrasp_ST ATP-grasp_4 RimK GARS_A
Motif
Other DBs
NCBI-ProteinID: ABF02617
UniProt: Q0T7K9
LinkDB All DBs
Position
complement(361857..362897)
Genome map
AA seq 346 aa AA seqDB search
MSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDPAHIALRPSATSLAQ
VPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAAC
MDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKV
TSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDT
KYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINT
LPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNALKTTM
NT seq 1041 nt NT seq  +upstreamnt  +downstreamnt
gtgtctctgcaatcggcaaaaaacattgtcgatgccattgataaaagtcgcttcgacgtt
gtgctgctgggcattgataaacaagggcaatggcacgtcagcgatgccagcaattatctg
ctaaatgcagacgatcctgcccatattgcgttgcgcccttcggcgaccagccttgcgcag
gtgccaggtaaacatgagcatcagcttatcgacgcgcaaaacggtcagccgttgccgacg
gtggatgtcattttcccgattgtccacggtacgctgggcgaagatggttccttgcaggga
atgctgcgggtcgccaatttaccgtttgtaggttctgatgttctggcttcagcagcctgt
atggataaagatgtcaccaaacgtctgctacgcgatgccgggctgaacattgcgccattt
attaccctgacgcgcgctaatcgtcacaacatcagttttgccgaagtggagtctaaactg
gggttaccactgtttgtaaaaccggctaatcagggctcttctgttggtgtcagcaaagta
accagtgaagaacagtacgcaattgccgtcgatctggcgttcgagttcgatcataaagtg
atcgttgagcaagggatcaaaggtcgtgagatcgaatgcgcagttctgggcaacgacaat
ccgcaagccagcacctgtggcgagatcgtactcaccagcgatttctatgcctacgacacc
aagtacattgacgaagatggcgcgaaagtggtagttccggcagccattgcaccagagatc
aacgataagatccgggcgattgccgttcaggcttatcagacgttgggatgcgcaggcatg
gctcgtgtagacgtgtttttaaccccagagaacgaagtggtgatcaacgagatcaacaca
ctgcctggcttcaccaacatcagtatgtatccgaagctgtggcaagccagcggtctgggt
tacaccgatctgatcacacgtttgattgagctggcgctggagcgtcacgctgcggataac
gcattgaaaaccacaatgtaa

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