Shigella flexneri 8401 (serotype 5b): SFV_2556
Help
Entry
SFV_2556 CDS
T00377
Symbol
xseA
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SFV_2556 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfv03400
]
SFV_2556 (xseA)
Enzymes [BR:
sfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SFV_2556 (xseA)
DNA repair and recombination proteins [BR:
sfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SFV_2556 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
ABF04655
UniProt:
Q0T210
LinkDB
All DBs
Position
2619427..2620797
Genome browser
AA seq
456 aa
AA seq
DB search
MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK
LQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDD
APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSSRQRLEMAMDYYLANRTRRFTQIH
HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIHRT
QTRIQQLEYRLAEILRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKV
KQVKAGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttctcaatcccctgcaatttttaccgttagtcgcctgaatcaaacggttcgt
ctgctgcttgagcatgagatgggacaggtttggatcagcggcgaaatctctaatttcaca
caaccggcttccggtcactggtactttacactcaaagacgacaccgcccaggtacgctgc
gcgatgttccgcaacagcaaccgccgggtcaccttccgtccgcagcatgggcaacaagtt
ttagttcgcgccaatattacgctctacgagccgcgcggcgactaccagataatcgttgag
agtatgcagccggccggtgaagggctgctgcaacagaagtacgaacagctcaaagcgaag
ttgcaggctgaaggtttgttcgatcagcaatacaaaaaaccactcccctcccctgcgcat
tgcgttggtgtgatcacctcaaaaaccggtgctgcgctacatgatattttgcatgtgtta
aaacgtcgcgatccttctctaccggtgatcatctaccccacctccgttcagggcgatgac
gcgccggggcaaattgttcgcgccattgaactggcgaatcagcgcaatgagtgcgacgtg
ttgatcgttgggcgcggcggcggttcgctggaagatttatggagttttaacgacgaacgc
gtagcgcgggcgatttttgccagccgcattccggtcgtcagcgccgtcgggcatgagacg
gatgtgaccattgccgattttgttgccgatctgcgtgcgccaacgccgtctgccgccgct
gaagtagtgagccgtaatcagcaagagttactgcgccaggtgcaatcgtcccgtcaacgg
ctggagatggcgatggattattatctcgccaaccgtacgcgtcgctttacgcagattcat
catcgcttgcagcagcagcatccgcagctccggctggcacgccagcaaaccatgcttgaa
cgcctgcaaaaacggatgagctttgcgctggaaaatcagcttaagcgtgccgggcaacag
cagcagcgattaacacagcggctgaatcagcaaaatccacagccgaagattcatcgcacg
caaacgcgcattcagcaactggaatatcgtttagcagaaatcctgcgcgcacagcttagc
gccacgcgtgaacgtttcggtaatgcagtaacgcacctcgaagccgtaagcccactgtca
acgctggcgcgtggatacagcgttactactgctactgacggcaatgtactgaaaaaagtg
aagcaagttaaagcgggtgaaatgctaaccacacgtctggaagacggctggatagaaagt
gaagtaaaaaacatccagccggtaaaaaaatcgcgtaaaaaggttcattaa
DBGET
integrated database retrieval system
