Shigella flexneri 8401 (serotype 5b): SFV_2607
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Entry
SFV_2607 CDS
T00377
Symbol
yfhC
Name
(GenBank) putative deaminase
KO
K11991
tRNA(adenine34) deaminase [EC:
3.5.4.33
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfv03016
]
SFV_2607 (yfhC)
Enzymes [BR:
sfv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.33 tRNA(adenine34) deaminase
SFV_2607 (yfhC)
Transfer RNA biogenesis [BR:
sfv03016
]
Prokaryotic type
tRNA modification factors
Deaminases
SFV_2607 (yfhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MafB19-deam
dCMP_cyt_deam_1
Bd3614-deam
SNAD4
APOBEC_N
NAD1
NAD2
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
ABF04704
UniProt:
Q0T1W1
LinkDB
All DBs
Position
complement(2677931..2678434)
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AA seq
167 aa
AA seq
DB search
MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEI
MALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMLHSRIGRVVFGARDAKTGAAGSLMDV
LHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaagtcgaatttagccacgaatactggatgcgtcacgcgctgacgctggcgaaa
cgtgcctgggatgagcgggaagtgccggtcggcgcggtattagtgcataacaatcgggta
atcggcgaaggctggaaccgcccgattggtcgccatgatcccaccgcacatgcagaaatc
atggccctgcggcagggtggtctggtgatgcaaaattatcgtctgatcgacgccacgttg
tatgtcacgcttgaaccatgtgtaatgtgtgccggagcgatgctccacagtcgcattggt
cgcgtggtctttggtgcgcgtgacgcgaaaactggcgctgcgggatctttaatggatgtg
ctgcatcatccgggtatgaatcaccgagtggaaattacggaaggaatactggcggatgag
tgcgcggcgttgctcagtgacttctttcgcatgcgccgccaggaaattaaagcgcagaaa
aaagcgcaatcctcgacggattaa
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