Shigella flexneri 2457T (serotype 2a): S0391
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Entry
S0391 CDS
T00128
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta, NS1 (HU-1)
KO
K03530
DNA-binding protein HU-beta
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfx03032
]
S0391 (hupB)
03036 Chromosome and associated proteins [BR:
sfx03036
]
S0391 (hupB)
03400 DNA repair and recombination proteins [BR:
sfx03400
]
S0391 (hupB)
DNA replication proteins [BR:
sfx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
S0391 (hupB)
Chromosome and associated proteins [BR:
sfx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
S0391 (hupB)
DNA repair and recombination proteins [BR:
sfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
S0391 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SeleniumBinding
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AAP15919
UniProt:
P0ACF7
LinkDB
All DBs
Position
396352..396624
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcg
gctggccgtgcgttagatgctattattgcttccgtaactgaatctctgaaagaaggggat
gatgtagcactggtaggttttggtacttttgccgttaaagagcgtgctgcccgtactggc
cgcaacccgcagaccggtaaagagatcaccatcgctgccgctaaagtaccgagcttccgt
gcaggtaaagcactgaaagacgcggtaaactaa
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