Sinocyclocheilus grahami (golden-line barbel): 107548879
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Entry
107548879 CDS
T04918
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04142
Lysosome
sgh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107548879
04142 Lysosome
107548879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107548879
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107548879
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107548879
Exosome [BR:
sgh04147
]
Exosomal proteins
Proteins found in most exosomes
107548879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
107548879
NCBI-ProteinID:
XP_016085207
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGDQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTI
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVERKVSQPIEGHAAGFGQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRNNLAG
AEELFGRKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEAPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIV
NFSQDSEVHFKYIQAACKTGQIKEVERICRESNCYDPEHVKNFLKDLYQEAKLTDQLPLI
IVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILV
VRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNHPERFLR
ENPYYDSRVVGKYCEKRDPHLACVTYERGQCDQELINVCNENSLFKSLSRYLVRRRDPEL
WASVLLETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDN
SVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKF
DVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPS
AYMEVVQVASQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNN
AHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKE
VCFACVDGNEFRLAQICGLHIVVHADELEELINYYQDRSYFEELITMLEAALGLERAHMG
MFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAI
ITMMSHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRA
VSFFSKVKQLPLIKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISL
AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLQ
WFLQEDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVTREYLSKVDKLET
SESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYTAAPGYPQAPPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcccatcagattccaggagcacctgcagctccaaaatttggggatc
aacccagccaacatcgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgggagaaggtcggagatcaggcacaggtggtgatcatcgacatggcagacccaaacacc
cccatccgcaggcccatctctgcagatagcgccataatgaaccctgcgagcaaagtcatt
gcacttaaagacgctgccaaaacccttcagatctttaacatcgagatgaagagtaagatg
aaagcccacaccatgactgatgatgtcactttctggaagtggatctctcttaacaccatt
gccctggtgaccgataacgctgtctatcattggagcatggagggagactctcagccggtc
aaagtgttcgacagacattccagcctggcgggctgtcaaatcattaactaccgcaccgat
gccaagcagaagtggctgctgctcattggcatttctgctcagcaaaaccgagttgttggt
gccatgcagctatactcagttgaaaggaaggtgtcacagcctatcgagggtcatgccgct
ggctttggacagttcaaaatggagggaaatgcagaagaatccactctcttctgttttgct
gtgcgaggtcaggcaggaggaaagcttcacattattgaagtggggacgccaccaaccggc
aaccagccattcccaaagaaagctgtggacgtgttcttccctccagaagcacaaaatgac
ttccccgttgccatgcagatcagctccaaacaggacgtcgtatttctaatcactaaatac
ggttacattcatctgtatgacctggagacgggcacctgcatctacatgaacagaatcagc
ggagagaccatttttgtgacggcaccccacgaagccacatctggaatcatcggcgtgaac
aggaaaggacaggtgttgtcagtgtgtgttgaggaggagaacatcatccagtacatcacc
aatgtgctgcagaatccagacctggctttacggatggcggtccgaaataatcttgcagga
gccgaggagctgtttggccgcaagtttaacaacctctttgccgcaggaaactactctgag
gcagctaaagtggccgctaatgctccaaagggtatcctgcgcactcctgacaccatccgt
cggttccagggcgtcccggctcagcccggccagacatccccactcctgcaatatttcggg
atcctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcagaccagtc
cttcagcagggccgcaaacagcttctggagaaatggctgaaggaggacaagcttgagtgc
tcagaggagttgggcgacttggtgaagtctgtggaccccactcttgctcttagtgtctac
ctgagggccaacgtacccaacaaagtcattcagtgttttgcagaaaccggccagttcccc
aagattgtcctgtatgccaaaaaggtgggctacaccccagactggatctttctgctgagg
aacgtgatgcggatcagtccggatcagggtctgcagtttgctcagatgctcgttcaggat
gaggaaccgctggctgacatcacacagatcgttgatgtgtttatggagtataacctggtc
cagcagtgcacgtccttccttttggatgctctgaaaaacaaccgcccatctgaagctcca
ctgcagacccgtctgctggaaatgaacctgatgcatgcaccacaggttgcagatgccatc
ctaggaaatcagatgttcactaactacgatcgtgcccacattgcccagctgtgtgagaag
gcagggcttctgcagagagctttagagcactatactgacctgtacgacatcaaacgagct
gtcgtacacacacacctgctcaacccggagtggctggtgaacttttttggcgctctgtca
gtggaggactctctggagtgtctaagagccatgctgtccgctaacatcaggcagaacctt
cagatctgtgtccaggtggcctccaagtatcatgagcagctatctacccaggcgctcact
gagcttttcgagtctttcaagagttttgagggtctgttctacttccttggctcgattgtg
aacttcagccaggactcagaggtgcatttcaaatacatccaggccgcatgcaagacgggc
caaatcaaagaagtggagcggatctgtcgggaaagcaactgctatgaccctgaacatgtc
aagaactttctcaaggacttgtatcaggaagctaaactcacggaccagctccctctcatt
attgtgtgtgatcgctttgacttcgtccatgatcttgtactctacctgtaccgaaacaac
ctgcagaagtacatcgaaatctacgtgcaaaaggtgaacccaagccgtttgcctgtggta
attggagggctcctggatgttgactgctccgaggacgtcatcaaaaacttgatcctggtt
gtgcggggccagttttccaccgatgagctggtggcagaagtggagaagagaaacagacta
aagctgttgttgccatggctggagtctcgtatccacgagggctgtgaggagccagctacc
cacaatgccttggccaagatctacattgacagcaacaaccacccagaacgcttcctgcgg
gaaaacccatactacgacagccgtgtggtggggaaatactgcgagaaaagagaccctcac
ctggcctgtgtgacctatgagagaggacagtgtgaccaggagctcatcaacgtgtgcaat
gagaactcgctgttcaagagtttgtcccgttacctggtgcgccgcagagacccagagctt
tgggccagcgtgcttttggagaccaacccctacaggaggccccttattgaccaggtggtg
cagacagccctgtcagagactcaggacccagaggaggtgtccgtcacagtgaaggccttc
atgactgctgacctgcccaatgaactcattgagctgctggaaaagatcgtcctggacaac
tctgtctttagcgaacacagaaacctacaaaacctgctcatcctaacagccatcaaagca
gaccgcacccgtgtcatggaatacatcaaccgcctggacaactatgatgccccagacatc
gccaacatcgccatcagcagcgagctgttcgaggaggcctttgctatcttcaggaaattt
gacgtcaacacctctgcagtgcaggttctgattgagcacatcggtaatctggaccgggcg
tatgagtttgcggagcgctgtaatgaacctgcagtgtggagccagctggctaaggctcag
ctgcaaaagggtctcgtcaaagagtccattgactcctacatcaaggctgatgacccctct
gcctacatggaggtggttcaggtcgcttcccagagtggtaactgggaggacctggtgaag
tttctacagatggccagaaagaaggccagagagtcatacgtggagaccgagctgatcttc
gcactggccaaaaccaaccgtctcgctgaactggaggagtttataaatggaccaaataat
gcacacatccagcaggttggagatcgctgctatgatgagaagatgtacgaggcggccaaa
cttctatacaataacgtctccaactttggccgcttggcttctaccctggtccacttgggc
gagtatcaagcggctgtggacggtgcccgcaaggctaacagcactcgcacatggaaggag
gtgtgctttgcttgtgtggatggaaatgagttcagattggctcagatatgcggccttcac
atcgtggttcatgccgatgagttagaagagctcatcaactattaccaggaccgtagctac
ttcgaggagctgatcaccatgctggaggcggcgctggggttggagcgcgctcacatgggc
atgttcactgagctggccatcctctactctaaatttaaaccacagaagatgagggaacac
ctggaactcttctggtccagagtcaacatcccaaaggtcctgagggccgcagagcaagct
cacctgtgggcagagcttgttttcctctacgacaagtatgaagaatacgacaacgccatc
atcaccatgatgagccatcccacagatgcctggaaagagggacagttcaaggacatcatc
accaaggtggccaacgtggaactgtactacaaagcaatccagttttatctggagttcaag
cccttgttactgaacgacctgctcatagttctttccccgagactggatcactctcgtgcc
gtcagcttcttcagtaaggttaagcagcttcctctcatcaagccttatctgcggtcagta
caaaatcacaacaacaagtctgtcaatgaagcacttaacaacctcttcatctcagaggaa
gactatcaggcactcaggacatctatagacgcatacgataactttgacaacatctcactg
gcccagcgtctggagaaacacgagctgatcgagttcaggagaatcgctgcttacctcttc
aagggcaacaaccgatggaagcagagtgtggagctgtgcaagaaagacaaactctacaag
gatgcaatgcagtatgcgtctgagtcgaaggacatagaactggccgaggagctgctgcag
tggttccttcaggaagacaagaaggagtgtttcgccgcctgcctcttcacctgctacgac
ctgctcaggcctgatgtggtgctggagacggcgtggaggcacaacatcatggacttcgcc
atgccttacttcatccaggtgacgagggaatacctcagcaaggtggacaagctggagacc
tccgaatccttgaggaaagaagaggagcaggccacagagactcaacccattgtttatggc
acgcctcagctcatgctgacagcaggtcccagtgtgcctgtccccccgcagcaggcttat
ggctatgggtacacagcagcgcctggctacccccaggctcctccggcacagccgggtttc
ggttacggcatgtaa
DBGET
integrated database retrieval system
