Sinocyclocheilus grahami (golden-line barbel): 107550206
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Entry
107550206 CDS
T04918
Name
(RefSeq) nuclear receptor ROR-alpha-like
KO
K08532
RAR-related orphan receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107550206
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107550206
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107550206
Nuclear receptors [BR:
sgh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
107550206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107550206
NCBI-ProteinID:
XP_016086933
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MESSPEPASDPGNGVSEPVTPARETPVNLETLRKAEHQAPVRRQSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLTVGMSRDGXXXGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
TYGLSTNGLTELHDDLSGYMNGHTPDGTKPDSGVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFTPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKKKTVYTNSHYCTPCGSAENATCSLEVVFVRMCRAFDPQNNTVYFDGKYAG
PDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFSAFVLMSADRSWLQEKVKVEKLQQ
KIQLALQHVLQKNHREDGMLTKVLDT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctctccagaaccagcgagcgacccgggcaacggcgtctcagagccggttacc
ccggccagggaaaccccggtaaacctggagaccctccgcaaagctgagcaccaagccccg
gtgcgccggcagagctgctccagcacaaacagaggtatttcagtaacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tatggcgtgataacgtgtgaggggtgcaagggcttcttcaggaggagtcagcagagcaat
gcggcgtactcgtgcccgcgtcagaagaactgcctgattgaccgcaccagccggaaccgc
tgccagcactgtagactgcagaagtgtctgaccgtgggcatgtcacgtgacggnnnnnnn
nntggccggatgtcaaagaaacagcgggacagcctctatgcggaagtacagaaacaccgg
ctccagcagcaacagcgggaccaccagcagcagcccggtgaggcagagccccttacccca
acctacggcctctccaccaatggcctgaccgagctccacgatgacctgagcggctatatg
aatggccacacgcccgacggcaccaagcccgactcgggcgtcagcagcttttacctggac
atccaaccctcgcccgaccagtccggcctggacatcaacggcatcaagccagaacccatc
tgcgacttcaccccgggctcgggcttcttcccctactgttccttcacaaatggggagaca
tcccccaccgtttccatggccgagttggaacatctggcccagaacatttccaagtcccac
atggagacgtgtcagtacctgagagaagaacttcagcagatgacctggcaggcgttcctt
caggaggaggtggagagctaccagagcaagaagaagacggtttacactaattctcactat
tgcaccccttgtggcagtgctgagaatgcaacatgctctttggaagtggtgttcgtcaga
atgtgccgtgccttcgaccctcagaacaacacagtctatttcgacggaaagtatgcgggg
cctgatgtctttaagtcattaggttgcgacgacttgatcagctctgtcttcgagtttgga
aaaaacttgtgttctatgcacctctctgaagacgagatcgccctgttctctgccttcgtg
ttgatgtctgcagatcgatcctggctccaggagaaggtgaaggtggagaaactccagcag
aagatccagctggccctccaacatgttctacagaagaaccacagagaggacggcatgctg
acaaaggtactggacacataa
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