Sinocyclocheilus grahami (golden-line barbel): 107552211
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Entry
107552211 CDS
T04918
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sgh01009
]
107552211
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107552211
04131 Membrane trafficking [BR:
sgh04131
]
107552211
03036 Chromosome and associated proteins [BR:
sgh03036
]
107552211
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107552211
Protein phosphatases and associated proteins [BR:
sgh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107552211
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107552211
Membrane trafficking [BR:
sgh04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107552211
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107552211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF6377
Motif
Other DBs
NCBI-GeneID:
107552211
NCBI-ProteinID:
XP_016089545
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MEARRKGRMDRSKEEEEMSNELQNLDVRGKTKATGTGLVYVDAFTRFHCLWDASHPECPA
RVSTVMEMLETEGLLGRCVRVEARAVSEDELLLVHTKEYAELMKSTQKMTEEELKTLADK
YDSVFLHPEFFTSACLAVGSVLQLVDKVMTSQLRNGFSINRPPGHHAHADKMNGCCMFNH
LAVAARYAQKQHGVKRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKES
DSSSVGSGAGQGYNINLPWNKIGMEDGDYITAFQQLLLPVAYEFQPQLVLVAAGFDSVIG
DPMGEMRVSPQCFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASVRSLLGDPCPHL
ISPGAPSESALKSISKTISALYPFWKSLQTFEGGPLSDVPPLPAPVCAEVKASSLITGLV
YDQRMMLHHNMWDGHHPELPQRISRIFCRHEELGLLSRCLRIPARLATEEELALCHSSEH
ISTIKSTEHMKPRDLHRLGNDYNSIYISNESYTCALMAAGSCFNSVQAILTGQVRNGVAI
VRPPGHHAEKDTACGFCFFNTAALTARYAQCTTHESLRVLILDWDVHHGNGTQHIFEEDD
SVLYISLHRYEDGTFFPSSEDANYDKVGQAKGRGYNVNIPWSGGKMGDPEYLAAFHHIVM
PIAREFAPELVLVSAGFDAARGDPLGGYQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNL
TSISESMSMCTSMLLGDSLPPLDHLPPPKTNATVTINSVLRALAPFWSSLRIQIPESLRL
ALPSPKPKGKRASAGKGKKSPRHSTPAQSPGQTPQHLQQSGLDELSKDLLSLNLNTSSSS
NPSPASIPIGGARRKVKPTPQRDSADRESDSPLKLKSEKTRAVDDTHAEITADRTIPESV
VTGNSAAVDDQENSVLEAAGGQATMMSVLERVFGAQATDLDTMYAVDPLPWCPHLESVRP
VPAGGIDVFLPCEECGGDTENWICLFCYKVLCGRYVKQHMVTHGQESGHPMVLSFADLSV
WCYACESYVHNKVLHEAKNTAHLVKFGEEIPPFN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggaggaagggcagaatggatcggagcaaagaggaggaggagatgagcaat
gagctccaaaacttggatgttcgtggtaagactaaagcaacaggaacaggtctcgtctac
gtagacgcctttactcgctttcactgcctctgggatgccagtcacccagagtgtccagcg
agagtgagcactgtgatggagatgctggagacggaaggcctgctgggacgctgcgtacga
gtagaggccagagctgtgtcagaagatgagctgttactcgttcatacgaaggagtatgca
gagctgatgaaatccactcagaaaatgacagaggaggagctgaagactctggctgataaa
tatgactctgtcttcctgcatcctgaatttttcacctctgcctgtctggctgtgggatcg
gttctccagctggtggataaggtgatgacatcacagctgcgtaacggcttctccatcaac
aggcctcctggtcaccacgctcatgcagataagatgaacggctgctgtatgtttaaccat
ctggccgtagcagcgcgctacgctcagaaacagcatggagttaaacgagttctaattgtg
gattgggatgtgcatcacggacagggaatccagtatatttttgaagaggatcccagtgtg
ctgtatttctcagtgcacagatatgaagacggctcgttctggccgcacctcaaggagtct
gacagcagttcggtgggttcaggagcaggacagggctacaatatcaacctgccctggaac
aagatagggatggaggatggagattacatcacagctttccagcagctactcctgcctgtg
gcgtatgagttccagcctcagctggtgttagtggcggccggatttgactctgtgatcggt
gacccaatgggtgagatgcgagtgagtccacagtgcttctccatcctgacccacatgctg
aaaggtgtagcacagggacgacttgtgctggctcttgagggtggatataacctccagtcc
acagcagagggtgtttgtgctagtgtgaggtcactgctgggtgacccttgccctcatctg
atctctcctggtgctccgagtgaaagtgccctgaagtccatctcaaagaccatctcagcc
ttgtatccattttggaagagtcttcagacgtttgagggtggtcctctgtccgatgtccct
cccctgcccgctccagtgtgtgcagaagtgaaggcttcctctctgatcactggactagtt
tacgaccagagaatgatgcttcatcacaacatgtgggatggtcatcatccagagctccct
cagagaatttcacgcatcttttgccggcatgaggagttgggtctgctgtcccgttgcctt
cggataccagctcgcctagcaacagaagaagagctggcactctgtcacagttctgagcac
ataagcactataaagagtacagagcacatgaagcccagagatctgcacagactgggaaac
gattacaactccatctacataagtaatgagagctacacctgcgccctgatggccgctggc
tcgtgttttaactccgtacaggccatactcacaggccaggtgagaaacggcgtggccata
gtccgtcctcctggtcatcatgcagagaaagacacagcttgtggtttctgtttctttaat
acggccgctttgaccgcacgctatgcccagtgcaccactcacgagtctctacgcgtcctc
atcctcgattgggatgttcatcatggaaacggcacacagcacatctttgaggaggatgac
agtgttctgtacatctctctgcatcgctacgaagacgggacattcttccccagttcggag
gatgctaactatgataaggtggggcaagcgaaaggcagaggatacaatgtcaacatcccc
tggagtggaggaaagatgggagacccagaatacttggcggctttccatcacatagtgatg
ccgatagccagagagtttgccccagagctggtgctggtgtctgctgggtttgatgcagca
cgaggtgatccgttaggagggtatcaggtgaccccagagggctacgcccacctcacccat
cagttaatgagcctggctgcaggaagagtgctagtcatactggagggaggatataacctc
acctccatctctgagtcaatgtccatgtgcaccagtatgttgctgggagactctcttcca
cctctagaccatctgccacctccaaagaccaatgccactgtcacgattaacagtgtcctg
cgtgctctcgcccccttctggagctccctgagaatacagattccagagtcacttcgtttg
gctttgccatctcctaaaccgaaaggcaagcgggcatcggcgggcaagggcaagaaatct
cctcgccactccacccctgcccaaagtcctggacagacaccgcagcatcttcagcagtcc
ggccttgatgagctcagtaaggacctgctctctctgaatctcaacacgagttcctcatct
aaccccagcccagcttcaatccccatcggaggagccagacggaaggtgaaacccacccca
cagagggattcagcagaccgggagtcagattcacccctaaaactcaagtcagagaaaacc
agagctgtagacgacacgcatgcggagattacggcggaccggaccatcccagagtctgtg
gtcactggaaattcagctgccgtggatgaccaggagaactccgtgctggaggctgctggt
ggtcaagccactatgatgtcagttttagaacgtgtctttggagcacaagccacggatttg
gacaccatgtatgcggtggacccgttgccatggtgcccacacttggagtcagtgcgaccg
gtgcccgcaggtggcatcgatgtcttcctgccatgtgaagagtgtggaggtgatacagaa
aactggatctgcctcttctgctacaaggtgctctgcgggcgttatgtgaagcagcacatg
gtgacccacggacaggagtcgggtcaccctatggtgctgagcttcgctgacctctctgtc
tggtgctacgcttgtgagtcatacgtccacaacaaggtgctccatgaagccaaaaatacc
gctcacctcgtgaagtttggagaggagattcctcctttcaactaa
DBGET
integrated database retrieval system
