Sinocyclocheilus grahami (golden-line barbel): 107568305
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Entry
107568305 CDS
T04918
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107568305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sgh04054
]
107568305
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107568305
Pattern recognition receptors [BR:
sgh04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107568305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
RIG-I_C-RD
DUF3890
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107568305
NCBI-ProteinID:
XP_016109739
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MDCNLRPYQEEVVQAALRGENSIIWMPTGGGKTRAAVYVTKKHLETTVNAKVAVLVNKVH
LVDQHFAKEFKPYLGSTYKITAISGDSNEKDLFGCLVKASDLVICTAQILENALINMEEE
KHVELTDFTLLVIDECHHTQKESVYNKIMGRYVEKKVRKEGNLPQILGLTASPGTGGNKQ
LDKAVEHVLQNEQKETIKHFRKGILNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQ
ASGRARAMNSVYSVVAEEGGREIRRELTNEYLESLTAKAIDQVQQMSPREFRLKISELQQ
ITVMSRIQAEKKKDEREQRYSPGQVQFQCRGCFLPVCSGEDLRKIENTHHVNINPEFE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggactgcaatcttagaccgtaccaggaggaggtggtgcaggcagcactcagaggggag
aacagcatcatctggatgcccaccggtggaggaaaaacccgtgctgcggtttacgtcact
aagaaacacctggagaccacagtcaatgccaaagtggcagtgctcgtcaacaaggtgcat
ctggtagaccagcactttgcaaaagaattcaagccttatcttgggagtacatacaagata
acagccatcagtggggacagtaatgagaaagacttgtttgggtgtctagtcaaggcctca
gacctggtcatctgcacggctcagatcttggagaatgccctgatcaacatggaggaagaa
aaacacgtggagctgactgactttaccctgctggtaatagacgaatgtcaccatacacaa
aaggagagcgtctataataagataatgggccgctatgttgaaaagaaagtgagaaaagaa
gggaatcttcctcagattttgggtctcacagcatcacctggtacaggaggaaataagcaa
ctggataaagctgttgaacatgtactgcagaatgaacaaaaggaaaccattaaacatttt
agaaaaggaatcctcaacctcctcatctccaccagtgtagctgaggaaggacttgatatt
ccagaatgcaacttagttgtacgttacgggctgttgaccaatgagatcgctcagcagcag
gccagtgggcgggctcgagctatgaacagcgtctactcagtggtagccgaagaaggtggg
cgtgaaatacgcagggaactcaccaatgagtatctagaaagtctgactgcaaaagctatt
gaccaagtgcagcaaatgagtcccagggagttcagactcaagatatccgagctccaacaa
atcactgtaatgagtcggatccaggccgagaagaaaaaggatgagagggagcagcgctat
agtcctggtcaagttcagtttcagtgcagaggatgcttcttgcctgtctgtagtggagaa
gatttaagaaaaatagaaaatactcaccatgtcaacatcaaccctgagtttgagtga
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