Sinocyclocheilus grahami (golden-line barbel): 107577469
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Entry
107577469 CDS
T04918
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107577469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107577469
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107577469
Protein recycling
Other Rab GTPase associated proteins
107577469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF3631
Syntaxin_2
Prominin
Motif
Other DBs
NCBI-GeneID:
107577469
NCBI-ProteinID:
XP_016119029
UniProt:
A0A672LRG1
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MSQRSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQKARQRQIQEDWALAEK
LQREEEAAYVSSHSSSQTQPPQSQSQQSLATFSKFEEKKTNEKTRKVTTVKKFFSPSSRT
APKKVPPEKESEKEEKLQGRRESHGENLLRDLKGIFTQPWEMASPTEALVSRLRESHEGK
TPSPSITRQSSIETDRVSRDFVEFLKTLQKLGRDIHKQSRGFIESMGNKNDLSAEELSEC
VQDFYQGMSDRLMNHFKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDEKKDLATQHR
IRALHWVTIQMLCVPVDEEIPEVSDSVVKAITDIIEMDSKRVPRDKLACITSCSKHIFNA
IRITKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCC
AVAFIEKLDAQSLNLSPEDFEHYMSGQASPRQQDDPAAWPQSGSRVNPALSQIHHNLKLL
SNLEKRQQEVTEGAQNLQTELSEWQDSVAREVQEILERYPLEIKPRASAIDAENVENDRL
PPPLQPQVFAG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgctcggagcgacgggggatccatgtggaccaatcagaactgctgtgtaag
aaaggctgcggttactatggcaacgctgcatggcagggcctatgctccaagtgctggagg
gaggagtaccagaaagctcggcagagacagattcaggaggactgggctctggctgagaag
ctgcagcgagaagaggaggcagcttatgtcagcagtcacagttcctctcagacccagcct
ccacagtcccagtctcagcaatctctcgccaccttctccaagtttgaggagaagaaaacc
aatgagaagacccgtaaggtcaccaccgtaaagaagttcttcagcccctcctcccgcacg
gccccaaaaaaagtcccccccgaaaaagaaagcgagaaagaggagaagttgcagggcagg
agggagagccatggagaaaacctcctgagggatctgaagggcatttttacccaaccctgg
gagatggcctcccccactgaagctctggtatcgaggctgagagagagccacgagggtaaa
acgcccagtccctcaattacccgtcagtccagcatcgagaccgatcgcgtgtcacgagac
tttgtggagttcctcaagaccttacagaagcttggcagagacatccacaagcagagccgt
ggtttcatagagagcatgggaaataaaaatgatctcagtgctgaagaactgtctgagtgt
gtgcaggacttctatcagggcatgtctgaccgactcatgaatcattttaaaggctcctct
gagaaagtggatagggtaatggaccaagtggaaaaatacatcatgactcgactctacaag
agtgtcttctgtccagagacctcagatgatgagaaaaaagacctggccacccagcacagg
attcgggccttacactgggtaaccattcagatgttgtgtgttcctgtggacgaggagatc
cctgaggtctctgatagtgtagtcaaagccatcaccgatatcattgagatggactccaag
cgtgtgcccagggataaactggcctgcatcaccagttgcagcaagcatatctttaacgcc
atcagaatcaccaagaatgaaccagcttctgcagatgacttcctacccaccctcatttat
attgtgttgaaggcgaacccaccacggctgcagtccaacatccagtacatcacacgtttc
tgcaacccttcaagactcatgacgggagaggacggatactacttcaccaacctatgctgt
gctgttgccttcatagagaagctggatgcccagtcgttgaatctcagccctgaggacttt
gagcactacatgtccggtcaggcttcccctcgacaacaagatgatcctgcagcctggccc
cagagtggttcccgtgtcaacccagcacttagccagatccatcataacctcaagctccta
tccaaccttgagaaaagacagcaggaggtcaccgagggggcgcagaacctgcagaccgaa
ctgtcagaatggcaggacagcgtggcccgcgaggtgcaggaaatcctggagcgataccca
ctggagatcaaaccacgagcatctgcgatcgatgcggagaatgtggagaacgacaggctg
ccaccaccccttcagccacaagtgtttgcggggtag
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