Sinocyclocheilus grahami (golden-line barbel): 107582638
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Entry
107582638 CDS
T04918
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgh03016
]
107582638
Enzymes [BR:
sgh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
107582638
Transfer RNA biogenesis [BR:
sgh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107582638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
107582638
NCBI-ProteinID:
XP_016124038
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MLFLAVVSCLLYCAVGAEMSGALNDVWEFTESYLLTVWQNRLYVYTTAAVLIGVWLTVNM
LFKKKKMVDPISPLLYKSVKNQELSPETEKVLYVSGVKVLYGSQTGTAKGFAKELAGGIS
AQGIQCEVIDMKEYDPEDRLAEECTSKMVCVFLVATYTDGQPTESTEWFCKWLEEASTDF
RYGKTFLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRH
GSVQADFHAWKTKFLNRLQALAKGEKKACSGKCKSGSCKNKKKHKEEAEDSQSHTEKNNS
EEELMESSSDAESSAEEEKSRGSVIDMEDLGNVMNRMKKAKRMEGDEEDSQRVKLSKQNG
VRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRTGVPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSF
LRLLHQQNISSFLVTNAQFPEEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFL
DSLRALGEKQQRTVYRLTLVKAWNVDELKAYADLISLGQPDFIEVKGVTYCGESSASSLT
MANVPWHEEVVYFVQQLANLLPDYEIACEHEHSNCLLLAHHKFKVDGKWWTWIDYERFQE
LIQEYEESGGTKSFSAMDYMSKTPSWAIFGAGERGFDPLDTRFQRKNKTKDISGC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttagcggtggtatcgtgtttgctgtattgtgcagtcggcgctgagatgtca
ggtgctttgaatgatgtttgggaattcactgagagctacctgctgactgtgtggcagaac
aggttatatgtgtacactactgctgctgttctcataggagtctggcttactgtcaacatg
cttttcaaaaagaaaaaaatggtcgaccctataagtcctctgctttataaatctgtgaaa
aatcaggaactttcacctgaaacagaaaaagtcctttatgtttctggggtcaaagtgctg
tatggatcacagacaggaactgcaaagggttttgcaaaagagcttgctggcggcatcagt
gctcaggggatccagtgtgaggttatagatatgaaagagtacgacccggaggatagactg
gctgaggagtgcacaagcaagatggtctgtgtgttcctggtggccacatacacagacggg
cagcccactgagagcaccgaatggttctgtaaatggcttgaggaagcctccacggacttc
cgatatgggaaaaccttcctgaagggaatgagatatgccgtctttgggctggggaactct
gtttatgtcggccattacaacactgtcagtaagaacatagataagtggctgtggatgctg
agcgctgcccggatcatgaccagaggagaaggcgactgcaacgttgtgaagagccggcat
ggcagcgtgcaggccgacttccatgcctggaaaacgaagttcttgaaccggctgcaggcc
ctggccaagggcgagaagaaagcctgctctggcaagtgcaagagcggcagctgcaagaat
aagaagaaacataaggaggaggcagaggacagccagtcgcacactgagaagaacaactct
gaggaggagctgatggagtccagcagtgatgcagagtcctccgctgaggaagagaagtcg
cgtggctccgtcatcgacatggaggaccttgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagaggactcccagagggtgaagctgtcaaagcagaatgga
gtgaggaagagcgagtcagaggaggagcggagagagatgatcactccagccttgagagat
gctctgactaaacaagggtacaaactaataggaagtcactctggggtaaaactgtgtcgt
tggaccaaatcaatgcttagagggagaggaggctgctataaacacaccttctatgggatt
gaatcacaccgctgtatggagaccacgccgagcctggcctgtgccaacaaatgtgttttc
tgctggagaacaggtgttccaggagtgcgtcccgagcgctttgaggagggcctcactgtg
aagcactgtgctctgtctctggtgggcgaacctatcatgtatcctgagatcaactccttc
cttcgactccttcaccagcagaacatatcgagcttcctcgtcacaaatgcccagttccct
gaggagatcaggagtcttgtgcctgttacacaactttacgtcagcgttgatgccagcacc
aaggacagtctgaagaaaattgaccgtcccctcttcaaagacttctggcagcgcttcttg
gacagtctcagagcgcttggtgaaaagcaacagcgtacggtgtacagactgaccctggtg
aaagcctggaatgtggatgagctgaaggcctacgcagatctcatctcccttggacagcca
gatttcatcgaggtcaagggagtgacatactgtggcgagagctcagccagtagcctgaca
atggccaacgtaccctggcacgaggaggtcgtctacttcgtgcagcagcttgccaacctg
ctcccagactatgaaattgcctgcgaacacgagcactccaactgtctgctacttgcgcac
cacaagttcaaagtcgacgggaagtggtggacgtggattgactacgaacgcttccaggag
ctcattcaggaatacgaggagagcgggggcaccaagagcttctcagcgatggactatatg
tccaagacccccagctgggccatttttggggccggagagaggggatttgaccccttggac
acacgcttccagagaaagaataagaccaaagatatctcagggtgctga
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