Sinocyclocheilus grahami: 107587320
Entry
107587320 CDS
T04918
Definition
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami
Pathway
sgh04010
MAPK signaling pathway
sgh04141
Protein processing in endoplasmic reticulum
sgh04210
Apoptosis
sgh04217
Necroptosis
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh04920
Adipocytokine signaling pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107587320
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107587320
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107587320
04217 Necroptosis
107587320
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107587320
04622 RIG-I-like receptor signaling pathway
107587320
09152 Endocrine system
04920 Adipocytokine signaling pathway
107587320
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107587320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107587320
04121 Ubiquitin system [BR:
sgh04121
]
107587320
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107587320
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107587320
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107587320
SSDB
Motif
Pfam:
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
Sina
MATH
zf_C2HC_14
zf-TRAF_2
ATG16
zf-RING_6
DASH_Dad3
DEC-1_N
zf-ACC
Spc7
Other DBs
NCBI-GeneID:
107587320
NCBI-ProteinID:
XP_016130528
LinkDB
Position
Unknown
AA seq
574 aa
MAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICLKILRRPFQAQCGHRFCSYCFNK
AVSSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEECSWTGTIKE
YEANHEGKCDFRILPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMTVEKEKIHDHEQACS
YKHLNLLLHFIMGIKVNLESLQPQSLELASHKVHELHQSLRELEQKMGQLSGAGAPVQGA
CALLPPPPAPTLGTSFTPLPTAVGAALELQLHSEKTKVAELSRRCQELELKVSTFENIVC
VLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEAKMREMSA
ATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL
SLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIAS
GCPLFCPLSKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq
1725 nt
+upstream
nt +downstream
nt
atggctgcacaggaaccctcaccaccatcttcattagaaggcaacaaacctggcttcccc
aagaaaatactcgccaacaagctggaggacaagcatctgtgcaatatctgtctgaaaatc
cttaggagaccgtttcaggcgcagtgcggacatcgtttctgttcttattgttttaataaa
gcagtgagctccggaccacagaaatgcagtgcctgtataaaggaggacatatttgaagaa
ccaacatcaattttgaaacagggctgtgcttttcctgataatgctgccaaaagagaagtt
gaagctcttgaagctgtttgcatcaatgaggaatgcagctggacaggcaccattaaagaa
tatgaggcaaaccatgagggaaagtgtgacttcaggatccttccctgcccatcatgcaaa
gaacttctaagagccaacgaacttgaacgtcacaatgagagagaatgcccagaaaggact
cttaattgtaaatactgcaaggagccattccattttaaaaacattaaggcccatgatgag
atatgccctaaatatcccatgatttgtgaaggttgtgccaagaaaaaaattcccagagag
aaatatgtggaccacattaaactgtgcaccaaattccgaacaccttgcagatttcacgtt
gtaggctgtgatatgacggtggaaaaggagaagatccatgaccatgagcaagcctgttcc
tacaagcacttaaacctcctattgcacttcatcatgggcatcaaggtgaacttggagagt
ctgcagcctcagagtctggaactggccagccataaggtccacgagctgcatcagtctctg
cgggagctggagcagaagatgggccagctgagtggagcaggggctcccgtgcagggggcc
tgtgcgctactgccgccaccgcctgctccgacgctcggtacgtctttcaccccactccct
acagccgttggggcagccttggagctgcagctacacagtgagaagaccaaagtggcggag
ctcagccgccgctgtcaggagctggagctgaaggtaagcacctttgagaacattgtctgc
gtgctcaaccgtgagatggagcgctccgccaccaccatggaggcctataaccgtcagcac
cggcttgaccaggacaagattgagatactcaacaacaaggtacggcagttggagaggaca
gtaggccttagggatctctccatcgtggagatggaggcaaagatgagggagatgtccgct
gccacttacgatggcgtgtttgtgtggaagatctccgacttctcgaagaagagacaagat
gctgtagccggacgggcacctgctatgttctcgcctgcattttacacaagcaaatatggc
tataagatgtgtttgcgcatctatctgaatggggatgggacgggacgtggtacacacttg
tctctgttcttcgtggtgatgaggggacacagtgatgccttgcttaagtggcctttcaat
cagaaggtcaccctcatgttgctggatcagaacaacagggagcacatcatcgatgccttc
cggccagatatttcctcttcctccttccagaggcctgtgagtgacatgaacattgccagc
ggctgccctctcttctgccctctctccaaactagacaccaagaactcctacatccgagat
gacaccatcttcatcaaggccattgttgacctcacaggcctttaa
DBGET
integrated database retrieval system
