Sinocyclocheilus grahami (golden-line barbel): 107592392
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Entry
107592392 CDS
T04918
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107592392
04020 Calcium signaling pathway
107592392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107592392
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107592392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107592392
NCBI-ProteinID:
XP_016137381
LinkDB
All DBs
Position
Unknown
AA seq
2152 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDLKCQSEWCVVLQKERMMEYSLDGHNASLSAIRTVRVLRPLR
AINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMPDNVKA
LYNLSHMSPYYMNEEGEDNPFICSTNKENGMLRCSQVPPLKEGVECTLNATPPGHAYSGL
DGTSNSSCVNWNQYYSECKPGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMD
AHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLAS
YSEPGSCYEEMLRYISHLYRKVKRRASRIYNSWQSKRRKKVNPNSGLSGGGGGGGGGGAN
GHNRHRGGGHWLRSIHSLIQQHQRQHCHLSNGSPSPVTATGPGEALEMRSIATGPQLTVS
SQPTAMHNLSSRTQSVHSIYQGDFQEVLQGRTSAAMGVQTLERLNGGMNYPTILPSLICS
YTGSSSAGKGRRESDADTGCDAIDPFEKLHQLMGEHSHSRVLLQMAGVVPSTLLLELLSC
PYCARALETMDGELGDSDYSRSEGDVMYDFSHGAEFKPCCASHHKILEERNRLAQYWDDF
RDRLIRIVDSKYFNRGIMIAILINTLSMGIEYHEQPEVLTNILEISNIVFTSMFVLEMLF
KMLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALR
RQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLKMENGDTIPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTTPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSDADEEKRSVNFEEEEKLGELQATELKMYSLMMSANGHVDPRGTLPPPIIMRTAAT
PMPTPKSSLGPESVFDLTESRRGSGISIDPNAFDQKSLTSPRRSPCHPRGSGSNWGSRRS
SWNSLGRAPSLKRKDTSGERESLLSGEGRGSFEDEDFEGVKLASISGGSLQHPSSLDIPE
LPQTPSFSSLGDYHDCNGRSLHLHLPTDLPTNLSKQDSIAEEDMDDSFCFRLKRTFEAYK
PKWCKDHEDWSLYLFSPQNRFRVMCQRLISHKLFDHIVLVFIFLNCITIALERPNIQPSE
RMFLSISNYVFTVIFFAEMTVKVVALGFCAGKHSYLKSTWNVLDGVLVFVSLVDILVSLA
SSGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVF
GILGVQLFKGKFYHCEGGDTKNITYKFDCIQANYKWIRRKYNFDNLGQALMSLFVLSCKD
GWVNIMYDGLDAVGVDMQPERNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQD
QEEEETRLREEKRQRLLEKKRRKAQQRPYYADYSPARLYIHTLCANHYLDLFITCIICIN
VVTMSIEHFNQPHYLVESLKYCNYVFTIIFIIEALLKLVAFGFRRFFKDRWNQLDLAIVL
LSIMGITLEEIKMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVG
NLGLLFMLLFFIYAALGVELFGKLECTDNNPCEGLSRHATFENFGMAFLTLFRISTGDNW
NGIMKDTLRECLPEEKHCLTYLPMVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEA
KEDAEMDAEIEMEMEMARRLSNVSAGSSSGPEGRATYVGARQDSPGQDEGMHRTQENLLS
PRKMSVSRMHSLPNDSYMFRPVRPASAPYPLEEVESSQGYLELGSITSVHSQPCESHSLL
QVPDVPPHSQFNYLPKIPPPMPSPTHSIGRTLRRQEAIKNDTIDVQSFDSKDNPNRQAGI
TTGSFKLHVPRMPPRGYAPSFYTFQQPHSQHNILSRPPSLASSSRSTSPSGSMFDSADPI
DEEVRHINSTARLWVGIQAEARSHSLSPYTTSGMLLPVPVKNCSSAANLSVKDPKKCFSV
DTEGFLEKPYGTDDHRRHSIEICSSVDDGLFGQKLSEKRHIPMRGQSLHIPRKKKMSPPC
ISIEPPFETEVPASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLIDKQLSTQPLIKVE
RHPSHCAEYLSLPHPTPMGNLAGILCESTQPSPFDNRFEESTDFSSVNRTAQ
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgattctgttgaactgtgtgactctgggcatgttccagccatgtgaggacctc
aagtgccagtctgagtggtgtgtcgtcctacagaaagaaaggatgatggagtattcactg
gatggtcataacgcgagcctatcagccatccggactgtgagagtgctcaggcccctgcga
gccatcaacagagtgcctagtatgaggatactggtgactctgcttcttgatactctgcct
atgttaggcaacgtcctcctgctgtgcttttttgtcttctttatattcggcattgtcggg
gtgcagctgtgggctggacttcttaggaatcggtgtttcatgccagataacgtgaaagcc
ctttataatctgtcacacatgagtccgtactacatgaatgaagaaggtgaggacaacccc
ttcatctgctccaccaataaggagaatggcatgctgcgctgtagtcaagtgccccccctc
aaggagggtgtcgagtgcactttaaatgcaactccaccgggacatgcctactctggcctg
gatgggacaagcaacagcagctgtgttaactggaaccagtattacagtgagtgtaagccc
ggggagctcaaccctcacaaaggggcagtgaacttcgataatattggatatgcctggatt
gcaatattccaggttattactttggaaggatgggtggacattatgtattacgttatggat
gcccactccttttacaattttatatattttatattgcttattatagtgggttccttcttc
atgatcaacctgtgcctggttgtaatagcaacccagttctcagaaacaaagcaacgtgag
aaccagctgatgcaggagcagcgagcacgttacctctccaatgacagcaccctcgccagc
tactctgagccggggagctgctacgaggagatgctcaggtacatcagccacctgtaccgc
aaggtgaagcgccgcgcttcccgcatatacaacagctggcagagcaaacgcagaaagaag
gtgaaccccaacagcgggctgagtggggggggaggaggaggcggcggcgggggggccaat
ggtcacaacaggcacaggggtggtggacactggcttcggtccatccacagcctcatccag
cagcaccaacgacagcactgtcacctcagcaatggcagccccagtcctgtgaccgctacg
gggcccggcgaggctctggaaatgaggtccatcgcaacggggccgcaactgaccgtgtcc
tcacagccaactgccatgcacaatctttcttccaggactcagtcagtgcacagcatttat
caaggtgactttcaggaggtcctgcaagggcgaacaagcgctgcgatgggtgtgcagacg
ctcgagcgactaaacggggggatgaattatccgactatcttgccctccctcatttgcagc
tatacaggcagcagttctgcaggaaaaggaagaagagagtcagatgcagatacaggatgt
gatgcgattgatccatttgagaagctgcaccagctcatgggagaacatagccacagtcgt
gtgctgctgcagatggctggtgtggtgcccagtacattgcttcttgagctcttgagctgc
ccgtattgtgcaagggccctggagaccatggatggggagcttggtgattcggactactcc
agatcagaaggggacgtgatgtacgatttctcccatggagcagagttcaaaccctgctgt
gcatcccatcataaaatactggaggagcgtaaccgcctggctcagtactgggatgacttc
cgggacagattgatacgcatagtggatagcaaatactttaatcgaggaattatgattgcc
atcctcatcaacaccttgagtatggggattgaataccatgagcagcctgaggtgctgaca
aacattctggagattagcaacatcgtcttcactagcatgtttgtcctcgaaatgctcttc
aaaatgctggcctttggcatcttcggctatatcaagaacccctacaacatctttgatggg
attattgtagtcataagtgtgtgggagatcattgggcaggcagatgggggtctttcagtg
ctgaggacgtttcgtctcctgcgtgtgctcaaactggtgcgcttcctccctgcactgcgc
agacagctggtggtcctgatgaagaccatggacaatgtggcaacgttctgcatgctgcta
atgcttttcatcttcacattcagcattcttggaatgcatctctttggatgcaaattcagc
ctgaaaatggagaatggagacaccattccagacaggaaaaactttgattccctgctgtgg
gccattgtcactgtgtttcagattctgacccaggaagactggaacgtggtcctctataat
ggaatggcttccactaccccatgggcggctctttactttgtggctctgatgacttttggg
aattatgtgctctttaacctactggtggccatcttagtggaggggtttcaggcagaggga
gatgctaacaggtcagatgcagatgaggaaaagcggtcagtgaactttgaagaggaggag
aagctgggggaattacaagctacagagttgaagatgtactctctgatgatgtcagcgaat
gggcatgtggatcctcgaggcactttgccccctccaatcatcatgcgcactgctgccacc
cccatgcccactccgaagagctcgctcggccccgagtcagtgtttgatttgaccgagtcc
aggcgaggcagtggcatctcaatagatccaaatgcttttgatcaaaaatctctgactagc
ccaagaagatctccatgccacccccgtggctcaggaagtaactggggcagccgcaggtca
agctggaacagcttaggacgggcgccgagtttgaaaaggaaggacacgtctggggagagg
gagtctctgctgtctggggagggcaggggcagctttgaggacgaggactttgagggtgtg
aagctggccagtatcagtgggggctctctgcagcatcccagctctctagatatccctgaa
ctgccccaaacccccagcttcagctcactgggagactaccatgactgcaatggaagaagc
ctgcacctgcacctgcccaccgacctgcccaccaacctcagcaaacaagactccattgca
gaggaggacatggatgatagcttctgtttccgtctcaagaggacgtttgaagcatataaa
cctaagtggtgtaaagatcatgaagactggtccctttatctgttctctcctcagaacagg
tttcgggtgatgtgtcaaaggttaatttctcacaagttgtttgatcatatagtcttggta
ttcatcttcctaaactgcattaccattgctctggaaagacccaatattcagccatctgag
cgaatgttcctcagtatctccaattatgttttcactgtgattttttttgctgaaatgact
gtgaaggtggtggccctcggcttctgtgctgggaagcacagttatctgaagagcacctgg
aatgttctggatggggtgctggtctttgtctctctcgttgacattctggtctccctggcc
tcctctggtggaaaccgaatccttggcatcctgagggttcttcgtctgctgagaactctg
cggccgctgagagtgattagtcgcgctcctggactgaaactggtggtggaaacgctaata
acatccctgaggcccattgggaacattgtgcttatctgctgtgccttctttattgtcttt
ggcattcttggagttcagctcttcaaaggaaagttttaccattgtgaaggtggcgatacc
aaaaacatcacctataagtttgattgtattcaagcaaactacaaatggattcggagaaag
tacaactttgacaacttgggacaggctctcatgtcgctgttcgtgctttcctgtaaggac
ggatgggtcaatataatgtatgacgggttggacgctgtcggggtggacatgcagcctgag
cgcaatcacaacccctggatgctcctctacttcatctctttcctgctgatcgtcagcttc
tttgtgctgaacatgtttgtgggagtggtggtggagaacttccacaagtgtcgtcaggac
caggaggaagaggagacacgtctgcgcgaggagaagaggcagagactgctggagaaaaag
cgcaggaaggcccagcagagaccatactatgcagattactctccagcccggctctacatc
cacacactgtgtgccaaccactacctggacctctttatcacctgcatcatctgcatcaat
gtggtcaccatgtctattgaacatttcaatcaacctcactaccttgtggagtcactgaaa
tactgcaactatgtctttaccatcatcttcataattgaggctttgctcaagcttgtggca
tttggctttcggagattcttcaaagacagatggaaccaactggatctagccatagtcctg
ctctctatcatgggcatcaccctggaggagatcaagatgaatgcagcgctgccaatcaac
cccaccatcatccgcattatgagggtgctgagaatagccagagtactgaagcttttgaag
atggctacaggcatgagagccctgctagacacagttatgcaagctttaccacaggtggga
aatctgggcttgctgtttatgctcctcttcttcatttatgcggcacttggcgtggagctt
tttggaaaactagaatgcactgacaacaacccttgcgaaggattaagcagacatgctacg
tttgagaactttggaatggcctttttaacgttattcagaatatcgacgggggacaactgg
aatggcataatgaaggacactctgcgagagtgccttccagaagagaagcactgcctcact
tatctgcccatggtctcccccatctacttcgtcacctttgtgctaatggctcagtttgtg
ctggttaacgtggtggtggctgtactgatgaaacacctggaggagagcaataaggaggct
aaagaagatgctgaaatggacgctgagattgagatggagatggaaatggctcggcgtctc
agcaacgtttcagcagggagctcttcagggccagaaggaagggcaacttatgtaggagca
cgccaagattcacctggacaggatgaggggatgcatagaacacaggagaatttgctctct
ccacggaaaatgtcagtgtcaaggatgcactctttgcccaatgacagctacatgtttcgc
cctgtgaggccagccagtgctccttatccactagaagaagtggaatccagtcaagggtac
cttgaattaggctctatcacctcagtccattcccagccatgcgaaagccattccctgctc
caggtccccgatgttcctccccattcccagttcaactacctccccaagattccccctccc
atgccctctccaacccacagcataggcaggactttacgcagacaggaggcaattaaaaat
gacaccatcgacgtgcaaagttttgactccaaagacaatcccaacagacaggcagggata
acaacaggcagcttcaagctgcatgttcctcgaatgcccccacgtggatatgcccccagc
ttctacaccttccagcagccccatagccagcacaatatcctttctcgacctcccagcctg
gccagcagcagcagaagcaccagccccagtggctccatgtttgattccgctgatccgatc
gacgaggaggtccgccacatcaacagtacagcacggctgtgggtagggattcaggcagaa
gcccggagtcactccctgtctccttataccacctcagggatgctgcttcccgtccctgtg
aagaactgcagcagtgctgccaacttaagcgtcaaagacccaaagaagtgcttcagcgtg
gacacagaaggttttctggaaaaaccctatggtaccgatgaccatcgtaggcattcaatt
gagatttgctcttcagtagatgacgggctgtttggtcaaaaactcagtgagaagaggcac
attccgatgcgtggacagtcattgcacattccccgtaagaaaaagatgagccctccatgt
atctccatcgagcccccatttgaaacggaagttcccgcttctcttgcatccatgaaaaag
ctgtcggagagcagcatgttactacggaggaggacgccatcctatgacctggccctacag
cgggactctctggatttgattgacaaacagctgtctacccagccgctcatcaaagtagag
cggcacccctctcactgtgccgagtatctgtccctgccgcaccccaccccaatgggcaat
ctggcaggcattttgtgtgaaagcacacagccgtccccctttgataaccgatttgaagaa
tccactgacttcagctctgtaaacaggacagcccaatga
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