Sinocyclocheilus grahami (golden-line barbel): 107595651
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Entry
107595651 CDS
T04918
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107595651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107595651
03036 Chromosome and associated proteins [BR:
sgh03036
]
107595651
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107595651
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107595651
mRNA degradation factors
5'-3' decay
Decapping complex
107595651
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107595651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
107595651
NCBI-ProteinID:
XP_016141620
UniProt:
A0A672QYR4
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MAMARTEIPASVMPMSKQNGQSKPMNLQPGSLTSSLQSGKTPVMSQKGCNIPQSSGGIRF
GDDWKKCLHLPPKDMRAKTTDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIP
IVLSGRDILARAKNGTGKSGAYLIPLLERIDMKKDYVQAIVLVPTRELALQMSQISINMS
KHLGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLMKKGVAKVDKAQMIVMDEA
DKLLSQDFVVLIEDIISFLPKNRQVLLYSATFPTSVQKFMTKHLQKPYEINLMDELTLKG
ITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKM
MQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRY
GHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSIDKSLYVAEFHSMNPDEEEAAHKAG
ELN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctatggcgagaacagagatccctgcttcagtcatgccaatgagcaaacagaatgga
cagtccaagcccatgaacctccagccaggatcgcttacttcctcattacagtcaggaaaa
acacctgtgatgtcccagaaaggatgcaatataccccaaagcagtggtggtatcaggttt
ggtgatgactggaagaagtgcctgcatcttccaccgaaagacatgagagcgaaaaccaca
gatgtgactgcaaccaaaggaaacgagtttgaagattactgccttaagagggaactgctg
atgggcatctttgaaatgggctgggagaagccttcccctatccaggaggagagtattcct
attgtcttgtcagggagggacatacttgcccgagctaaaaatggcacaggtaaaagcgga
gcctacctcatccccctcttggaaaggattgacatgaagaaggactatgttcaagccata
gtgttggtaccaactcgtgagttggctctgcagatgagccagataagtatcaacatgagc
aagcaccttggtggcgtcaaggtcatggctacaacaggtggcactaacctgagagatgac
attatgcgtcttgatgagactgtacatgttataatagctaccccaggaaggatccttgac
ttgatgaagaaaggtgtggccaaggttgacaaagctcagatgattgtgatggatgaggct
gataaattgctttctcaagactttgtggtgctcattgaggacatcatcagcttcctgccc
aaaaaccgccaggttttgctctattctgccactttccccaccagtgtgcagaagtttatg
accaaacaccttcagaagccatatgaaatcaatctgatggatgagctgacactgaaaggc
atcactcagtactatgcttatgtgacagaaagacagaaagtgcactgtctcaacacattg
ttctccaggctccaaatcaaccagtcaatcatcttctgtaactccacccaaagggtggaa
ctccttgccaagaagatcacacaacttggctattcctgcttttatatccacgccaagatg
atgcaggaatacagaaatcgtgtgttccatgacttcagaaacggactgtgtaggaacctg
gtctgcacggatcttttcacaagaggaattgacatccaggctgtcaatgtagtcatcaac
tttgacttccccaaaaatgcagagacatatctgcaccgcattggtcgatcaggtagatac
ggtcatctgggtctggccattaacctgatcacctcagaagatcgttttaacctaaagggc
attgaggaccagctgatgactgacataaagcccatacccagcagcattgacaagagcctg
tatgtggcagagtttcactccatgaacccagatgaagaggaggctgctcacaaagcaggc
gagcttaattaa
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integrated database retrieval system
