Scandinavium goeteborgense: A8O29_005095
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Entry
A8O29_005095 CDS
T06630
Symbol
rpoS
Name
(Genbank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgoe03021
]
A8O29_005095 (rpoS)
Transcription machinery [BR:
sgoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A8O29_005095 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QKN80697
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All DBs
Position
904026..905018
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AA seq
330 aa
AA seq
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MSQNTLKVHDLNEDAEFDENGTESFDEKVLVEEEPSDNEVAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQGQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttcatgatttaaatgaagacgcggaatttgatgagaac
ggaacagagtctttcgatgagaaagtcttagtagaagaggaacccagtgataatgaagta
gctgaggaagagctattatcgcagggtgccacacagcgtgtgctggatgcgactcagctt
taccttggggagattggttactccccactgttaacagccgaagaagaagtttatttcgca
cgacgtgcgttgcgtggtgacgtagcgtcccgccgccggatgattgaaagtaacctgcgt
ctggtggttaaaattgctcgccgttacagcaatcgtggtctggctttgctggatctgatt
gaagagggcaatctggggctgattcgtgctgtcgaaaaattcgacccagagcgcggattc
cgtttctcgacctatgcaacctggtggattcgtcagaccatcgaacgggcaatcatgaac
caaacccgtacgattcgtctgccaatccatatcgtcaaagagcttaacgtttatctgcgt
accgcgcgtgagttatcccacaagttggatcacgagccaagtgcagaagagattgctgag
cagctggacaaaccggttgatgacgtaagccgtatgcttcgtctcaacgagcgcatcacc
tcggtcgacaccccactcggtggcgattccgaaaaagcgctgctggacatcctggccgat
gaaaaagataacggcccggaagacaccacgcaggacgatgacatgaaacaaagcatcgtc
aaatggctgttcgaactgaacgccaaacagcgtgaagtgctggcacgtcgtttcggttta
ctggggtatgaagcggcaacgctggaagatgtcggccgtgagattggcctgactcgtgaa
cgcgttcgccagattcaggtcgaaggtctacgtcgcctgcgtgaaattctgcagggacaa
ggtctgaacatcgaagcgctgttccgcgaataa
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