Scandinavium goeteborgense: A8O29_014205
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Entry
A8O29_014205 CDS
T06630
Symbol
holB
Name
(Genbank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe03030
DNA replication
sgoe03430
Mismatch repair
sgoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8O29_014205 (holB)
03430 Mismatch repair
A8O29_014205 (holB)
03440 Homologous recombination
A8O29_014205 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgoe03032
]
A8O29_014205 (holB)
03400 DNA repair and recombination proteins [BR:
sgoe03400
]
A8O29_014205 (holB)
Enzymes [BR:
sgoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A8O29_014205 (holB)
DNA replication proteins [BR:
sgoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A8O29_014205 (holB)
DNA repair and recombination proteins [BR:
sgoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A8O29_014205 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
QKN82386
LinkDB
All DBs
Position
complement(2768395..2769399)
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPPFEQLVSSYQSGRGHHALLVQALPGMGADALVYALVRFQMCHTPEGQKSCG
KCHSCQLMQAGTHPDYYQLAPEKGKSTLGVDAVREITEKLYEHARLGGAKVVWVSDAALL
TEAAANALLKTLEEPPVNTWFFLQCEEPARLLATLRSRCRHFHLAPPAESYGIAWLNREV
TTSQENLLTALRLTAGAPAAALELLGESRFAPRQQLCAALDAALQSADWLSLLPALNHDS
VAERLYWLSSLLLDAQKMQQGISLLTNVDAWALVQRVANALSSSRLQAMIRDACVCREQL
LNVTGLNRELMLNDLLLRWEHWLQPTSVMPIHHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggttacgacctccgtttgagcaactggtcagtagctaccagtcc
ggacgcggccaccacgcgctattagtgcaagcattaccgggcatgggcgcggatgcgctg
gtctatgcgctggtgcgcttccagatgtgccacacgcccgaaggccagaaaagctgcggt
aaatgccacagctgccagctgatgcaagcgggtacgcacccggactattatcagctcgcc
ccggaaaaaggcaaaagtaccctcggcgttgacgcggtccgtgaaatcacggaaaagctc
tacgagcacgcccgcctgggtggggcgaaagtcgtgtgggtcagcgatgctgctttgctg
acggaagctgccgctaacgcattgctgaaaaccctggaggagccgccggttaatacctgg
ttcttcctgcaatgtgaagaacccgcgcggttactggctacattgcgcagccgctgtcgc
catttccatctggcaccgcctgcggaaagttacggcattgcatggcttaatcgagaggtg
acaacgtcacaagagaatttgctgacggcattacgtctgacggcaggcgcacccgctgcg
gccctggaactgctcggcgaatcgcgctttgctcctcgccagcagctttgtgcggcgctg
gatgcagcattacagagcgcagactggctgtcgttgctgcctgcgctcaatcatgacagc
gtggcggaacggctgtactggctgtcatccctgctgctggatgcgcaaaaaatgcagcag
ggcatttcactgttgaccaacgtggatgcgtgggcgctggttcagcgcgtggctaacgcg
ctttcttcttcacggctgcaggcgatgattcgcgatgcctgtgtatgccgggaacagctt
ctcaacgtcaccggactcaaccgtgagctgatgctcaacgaccttttactacgctgggaa
cactggctgcagccgacaagcgtgatgcccattcatcacctgtaa
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