Streptomyces griseochromogenes: AVL59_00010
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Entry
AVL59_00010 CDS
T04729
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03030
DNA replication
sgs03430
Mismatch repair
sgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL59_00010
03430 Mismatch repair
AVL59_00010
03440 Homologous recombination
AVL59_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_00010
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_00010
Enzymes [BR:
sgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL59_00010
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL59_00010
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL59_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ANP48162
UniProt:
A0A1B1ANK8
LinkDB
All DBs
Position
2994..4124
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AA seq
376 aa
AA seq
DB search
MKIRVERDVLAEAVAWAARSLPARPPAPVLAGLLLKAEDGQLSLSSFDYEVSARVSVEAE
VDEEGTVLVSGRLLADISRALPNRPVEISTDGVRATVVCGSSRFTLHTLPVEEYPALPQM
PNATGTVPGEVFAAAVSQVAIAAGRDDTLPVLTGVRIEIEGDTVTLASTDRYRFAVREFL
WKPENPEASAVALVPAKTLLDTAKSLGAGDSVTLALSGSGAGEGLIGFEGAGRRTTTRLL
EGDLPKYRTLFPTEFNSVAVIETAPFVEAVKRVALVAERNTPVRLSFEQGVLILEAGSSD
DAQAVERVDAQLEGDDISIAFNPTFLLDGLSAIDSPVAQLSFTTSTKPALLSGKPALDAE
ADEAYKYLIMPVRLSG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatccgggtggaacgcgacgtactcgcggaggcagtggcgtgggctgcacgcagc
ctcccggcccgtccgccggcgcctgtcctcgccggcctcctgctgaaggccgaggacggc
cagctgagcctgtcgagcttcgactacgaggtctccgcccgcgtgagcgtcgaggccgag
gtcgacgaggagggcacggtcctcgtctccggccgcctgctcgccgacatctcccgcgcc
ctccccaaccgtccggtggagatttccacagacggtgtacgggcgaccgtggtctgcggt
tcctcgcggttcaccctgcacaccctgcctgtggaggagtacccggcgctgccgcagatg
ccgaacgccacgggcaccgtccccggcgaggtcttcgccgccgccgtgtcccaggtggcc
atcgcggccggccgtgacgacacgctgcccgtcctcaccggtgtgcgcatcgagatcgag
ggcgacacggtcaccctggcctccaccgaccgctaccgcttcgcggtccgcgagttcctg
tggaagccggagaacccggaggcctccgccgtcgccctggtcccggcgaagacgctgctg
gacaccgccaagtcgctgggcgcgggtgacagcgtcacgctggcgctctccggctccggc
gccggcgagggcctgatcggcttcgagggcgcgggccgccggacgaccacgcgtctgctc
gagggcgacctgccgaagtaccgcacgctgttcccgaccgagttcaactccgtcgccgtg
atcgagaccgcccccttcgtggaggccgtcaagcgtgtggccctggtcgccgagcggaac
accccggtgcggctgagcttcgaacagggtgtgctgatcctggaggccggctccagcgac
gatgcacaggctgtggaaagggttgacgcgcagctggagggcgacgacatctcgatcgcc
ttcaacccgaccttcctgctggacggtctgagcgccatcgactctccggtggcccagctg
tcgttcacgacgtccaccaagcccgcgctgctcagtgggaagccggcgctggacgcggag
gcggacgaggcctacaagtacctgatcatgccggtgcggctgagcggctga
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