KEGG   Streptomyces glaucescens: SGLAU_04800Help
Entry
SGLAU_04800       CDS       T03327                                 

Gene name
lig
Definition
(GenBank) putative DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sgu  Streptomyces glaucescens
Pathway
sgu03030  DNA replication
sgu03410  Base excision repair
sgu03420  Nucleotide excision repair
sgu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SGLAU_04800 (lig)
   03410 Base excision repair
    SGLAU_04800 (lig)
   03420 Nucleotide excision repair
    SGLAU_04800 (lig)
   03430 Mismatch repair
    SGLAU_04800 (lig)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgu03032]
    SGLAU_04800 (lig)
   03400 DNA repair and recombination proteins [BR:sgu03400]
    SGLAU_04800 (lig)
Enzymes [BR:sgu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SGLAU_04800 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     SGLAU_04800 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SGLAU_04800 (lig)
DNA replication proteins [BR:sgu03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SGLAU_04800 (lig)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SGLAU_04800 (lig)
DNA repair and recombination proteins [BR:sgu03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SGLAU_04800 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     SGLAU_04800 (lig)
   MMR (mismatch exicision repair)
    Other MMR factors
     SGLAU_04800 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AIR96986
UniProt: A0A089X572
LinkDB All DBs
Position
1118688..1120226
Genome map
AA seq 512 aa AA seqDB search
MLLARLAQVSREVAATSARSRKTALLAELFREAQAADVPVVIPYLAGRLPQGRLGVGWKV
LGRPVAPAAEPSLTVREVDARLTALGEVSGPGSQAERTRLVGELMGAATQEEQRFLLGLL
TGEVRQGALDAVAVEGLAGATGAPPADVRRAVMLAGSLQTVAQALLTEGPPALERFRLTV
GRPVLPMLAHSASSVAEAVGKLGVCAVEEKLDGIRVQVHRDGGTVRLYTRTLDDITGRLP
EVTAAALELRGERFVLDGEVIAFDADGRPRSFQETAGRVGSRVDVATAAEAVPVSPVFFD
ALSVDGRDLLDLPFAERHAELARLVPEPMRVRRTVVSGPGGLPAAEEFLAETLARGHEGV
VVKDLGAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGRLSNLHLGARREDGSYA
MLGKTFKGLTDALLAWQTERLRELAVSDDGHVVTVRPELVVEIAYDGLQRSTRYPAGVTL
RFARVVRYREDKRPQDADTVETVLAAHPEVRP
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctggcccggctcgcccaggtgtcccgggaggtcgccgccacctcggcgcgctcc
cgcaagaccgcgctgctcgcggagctgttccgcgaggcacaggcggcggacgtccccgtg
gtcatcccgtacctggcggggcggctgccgcaggggcggctcggcgtcggatggaaggtg
ctcggccgccccgtcgccccggccgccgaacccagcctgaccgtgcgggaggtggacgcc
cggctcaccgccctcggcgaggtctccggacccggctcgcaggccgagcggacgcggctg
gtcggggagctgatgggcgcggccacgcaggaggagcagcggttcctgctgggcctgctc
accggcgaggtccgccagggcgcgctggacgcggtggccgtggagggcctggcgggcgcg
accggcgcgccgcccgccgacgtccgccgggcggtgatgctggcgggctcgctccagacc
gtggcgcaggcgctgctcaccgagggcccgcccgccctggagcgcttccggctcaccgtc
ggccgcccggtgctgccgatgctcgcgcacagcgcgtcctcggtggcggaggcggtcggc
aagctgggcgtctgcgcggtggaggagaagctggacggcatccgtgtccaggtgcaccgg
gacggcggcaccgtacggctgtacacccgcaccctcgacgacatcaccggccggctgccc
gaggtgacggcggcggcgctggagctgcgcggcgagcggttcgtcctggacggcgaggtc
atcgccttcgacgcggacggccggccgcgctcgttccaggagaccgcgggccgcgtcggc
tcccgagtggacgtggcgaccgccgccgaggcggtgccggtctcccccgtcttcttcgac
gccctctcggtcgacgggcgcgatctgctcgacctgccgttcgccgagcggcacgcggag
ctggcccggctggtgcccgagccgatgcgggtgcggcgcacggtggtgtccgggcccggc
ggcctgcccgcggcggaggagttcctggccgagacgctggcccggggccacgagggcgtg
gtggtcaaggacctcggcgcgccctacagcgcgggccggcgcggcgcgtcctggctgaag
gtcaaacccgtgcacaccctcgacctggtggtgctcgccgccgagtggggccacggccgc
cgcaccggcaggctctccaacctgcacctgggcgcccgccgcgaggacggctcgtacgcc
atgctcggcaagaccttcaagggcctgacggacgcgctgctggcctggcagaccgaacgc
ctgcgggagctggcggtgtccgacgacggccatgtggtgaccgtccggccggaactggtc
gtggagatcgcctacgacggcctgcagcgctccacccgctacccggccggtgtcacgctc
cgcttcgcccgcgtggtccgctaccgcgaggacaagcggccgcaggacgccgacaccgtc
gagaccgtgctggccgcccatccggaggtacggccgtga

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