KEGG   Syntrophobotulus glycolicus: Sgly_2232
Entry
Sgly_2232         CDS       T01429                                 
Name
(GenBank) Ribocuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sgy  Syntrophobotulus glycolicus
Pathway
sgy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Sgly_2232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgy03019]
    Sgly_2232
Messenger RNA biogenesis [BR:sgy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Sgly_2232
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Regulator_TrmB Lactamase_B_3
Other DBs
NCBI-ProteinID: ADY56521
UniProt: F0STZ8
LinkDB
Position
complement(2271066..2272730)
AA seq 554 aa
MPKEHKLQIIPLGGLGEVGKNMTVIRYGNQMILIDAGLAFPEDDMFGIDIVIPDYSYIID
NRDQLLGVFVTHGHEDHIGTLPYLLRDVDTHIYATTLTLGLIHAKLKENSINKFQATAVK
PGESIRLGHFKIEFIRVSHSIPDSVGLAIHTPLGTIVHTGDFKLDHTPVSGDILDIHKFS
ELGQKGVLCLMSDSTNVERPGFTQSESKVGQMFDEVFRAAKERIILASFASNVHRVQQVI
AAAVKTDRKVAIVGRSMLNYATIAAELGYLKIPEGTMVDVDEILNLPSNRICIVTTGSQG
EPMSALTRIAMNDHKKIEIQPGDTVIISATPIPGNEKSVAKTVDLLFRQGANVIHESASG
VHVSGHASREELKLMLNMVKPRYFVPVHGEYRMLIKHGQLAEQLGIPEENIFIAENGSII
EFTKNSACIAGKVTSGRILVDGLGVGDVGNIVLRDRKQLSQEGILIVVMTLSRSSGRIVA
GPDVVTRGFVYVRESESMLDEAKAKIRQTTERCLVSGNIEWALLKNQIRDVLGKHFYEKT
RRRPVILPIIQEVP
NT seq 1665 nt   +upstreamnt  +downstreamnt
ttgcctaaagaacacaaactgcaaattattcctctcggcggacttggtgaagttgggaaa
aacatgacggtcatccgttatgggaaccaaatgattctgattgatgcaggattagcattt
ccggaagatgacatgttcgggatcgatatcgtgattcccgactattcatatattattgat
aaccgagatcaattactgggggtttttgtcactcacggtcatgaagaccatatcggaacc
ctgccctatctgttaagagatgttgatacgcatatttatgccacaactttaaccttaggg
ctcatccatgccaaacttaaggaaaacagcattaacaaatttcaggcaactgcggtaaag
cctggagaaagcattaggctggggcattttaaaattgaatttatcagggtcagccacagt
atacctgattccgtgggactggcgatccatactccattagggacaatcgttcataccggg
gattttaagctcgatcatacccctgtttccggggatatcctggatatccataagttttcc
gagcttggtcaaaagggtgtcctttgtctgatgtcggacagtacgaatgtagaaagaccg
ggatttacgcaatcggagagcaaagtagggcagatgtttgatgaagtttttcgggcagcc
aaggaaagaattatcctggccagctttgcttctaatgtccaccgggttcagcaagtcatt
gccgcggcagtgaaaacagaccgcaaggtagcgattgtaggcagaagtatgctgaattat
gcgacgatagcggctgaacttggttatttaaagattccggaaggcacgatggtcgatgtt
gacgaaatcttaaaccttccaagcaatcgaatatgtattgtcacaacaggcagtcagggt
gagccgatgtctgctctgaccagaattgccatgaatgatcataagaagatcgagattcag
ccaggagacaccgtaatcatttcggcgaccccaattccgggcaatgaaaaatctgtggcg
aaaaccgttgatttactgtttagacagggagccaatgtcattcatgagtctgcttcagga
gtacatgtatcaggccatgccagtcgggaagaattaaagctgatgctgaatatggtgaag
cctcgatactttgtgccggttcatggggaatacaggatgttgatcaagcacgggcagctg
gcggagcagcttgggattcccgaggaaaatatttttattgccgaaaacggcagtatcatc
gaattcaccaaaaacagcgcctgtattgccggcaaggtcacatcgggcagaatactggtt
gacggcctgggcgtaggagatgtaggcaatattgtgctcagggacagaaagcagctttcc
caggaaggaatattaatcgtcgtgatgacgttaagccgttcctcaggacggattgtggcc
ggaccagatgttgtcaccagaggttttgtttatgtccgggagtcggaaagcatgttggat
gaggcgaaagctaaaatcagacagacgacagagcgttgtttagtcagcggcaatatagaa
tgggcgttgctcaagaatcaaatcagagacgtactcggcaaacacttttatgaaaagacc
cgccgcagaccggttattcttcccattatccaggaagtaccgtaa

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