Staphylococcus haemolyticus JCSC1435: SH0914
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Entry
SH0914 CDS
T00250
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SH0914 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sha03021
]
SH0914 (rho)
03019 Messenger RNA biogenesis [BR:
sha03019
]
SH0914 (rho)
Transcription machinery [BR:
sha03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SH0914 (rho)
Messenger RNA biogenesis [BR:
sha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SH0914 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
ATPase_2
Mor
Spore_III_AA
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAE04223
NITE:
SH0914
UniProt:
Q4L802
LinkDB
All DBs
Position
922294..923610
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AA seq
438 aa
AA seq
DB search
MPEKVRTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKSELVLAIMEAQMEKDGN
YYMEGVLDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEVVKKRPHFQALTPLYPEERIVLETDPQNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISKNKPDAKLFILLVGERPEEVTDIERSVESAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGQDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVETGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDSLWQLRNMFTDSTDFTERFIRKLKRSKSNKEFF
QQLQKAAEESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaagtacgtacatctccacagtatgagtcgtttcatgaattgtataaaaat
tacacaacgaaagaattaacacaaaaagcaaaaacattaaaacttactaattatagtaaa
ttgaataagagtgaattagttttagctatcatggaagcccaaatggaaaaagatggtaac
tattacatggagggtgtcttagatgatatccagcctgatggttatgggttcctaagaaca
gtcaactattcaaaaggtgaaaaagatatttatatatctgcaagtcaaatacgacgtttc
gaaattaaacgtggtgataaagtaaccggaaaagttcgtaaacctaaagataatgaaaaa
tattatggtttattgcaagttgactttgttaatgatgagaatgctgaagttgtaaaaaaa
cgccctcactttcaagctttaacgcctctctatcctgaggaaagaatcgttttagaaaca
gatccccaaaattattcaacacgtataatggatttagttacgcctattggtctaggtcaa
cgtggacttattgttgcacctcctaaagcgggtaaaacgtctttattaaaagaaattgca
aatgcgattagtaaaaataaacctgatgcaaaattatttattttattagttggggaacgt
ccggaagaagtaactgatattgaaagatctgttgaatctgctgaagtagtgcactcgact
tttgatgagccaccagaacaccatgttaaagtagctgaattattattagaacgtgctaaa
cgattagttgagattggtcaagatgttattattctgatggactcaattactcgattggca
agagcgtataacttagttataccgccaagtggaagaacattatcaggtggtcttgatcct
gcttcattacacaaacctaaagcattctttggtgctgcacgtaacattgaagcaggagga
agtttaacgatattagccactgcattagttgaaactggatcacgcatggacgatatgatt
tatgaagaattcaaaggaacgggaaatatggaacttcatcttgatcgtaaattatctgaa
cgtcgaattttccctgcgattgatattggaagaagttctacgcgtaaagaagaattacta
attagtaaatctgaacttgattcactatggcagttaagaaacatgttcacagactctaca
gatttcacagaaagatttattagaaaattaaaacgctctaaaagtaataaagaatttttc
caacagttgcaaaaggctgctgaagaaagtacaaaaacaggaaaaccgattatttaa
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