Salmonella enterica subsp. enterica serovar Heidelberg B182: SU5_0423
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Entry
SU5_0423 CDS
T02011
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
shb
Salmonella enterica subsp. enterica serovar Heidelberg B182
Brite
KEGG Orthology (KO) [BR:
shb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shb03019
]
SU5_0423
03009 Ribosome biogenesis [BR:
shb03009
]
SU5_0423
Messenger RNA biogenesis [BR:
shb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SU5_0423
Ribosome biogenesis [BR:
shb03009
]
Eukaryotic type
Pre-60S particles
RNases
SU5_0423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFH43799
LinkDB
All DBs
Position
495834..496379
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gaacgcgatcgcattattgagatagccacgctggtgacggatgccagcctgaacattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggcagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagacgctgaactggcgacgattgaatttctgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagcatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcctacttccactatcgctatctggatgtcagtacgctcaaggaactg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga
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