Shewanella sp. MR-4: Shewmr4_1932
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Entry
Shewmr4_1932 CDS
T00388
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
she
Shewanella sp. MR-4
Pathway
she00550
Peptidoglycan biosynthesis
she01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
she00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shewmr4_1932
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
she01002
]
Shewmr4_1932
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Shewmr4_1932
Enzymes [BR:
she01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Shewmr4_1932
Peptidases and inhibitors [BR:
she01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Shewmr4_1932
Peptidoglycan biosynthesis and degradation proteins [BR:
she01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Shewmr4_1932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ABI39006
LinkDB
All DBs
Position
complement(2302774..2304315)
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AA seq
513 aa
AA seq
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MTHSINKDQLQASFTRPKLKGLLLGSMLSILLPTQAIAAIHPLDESTFAKQIADIAPRHS
QVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTAMASLGPDFRYVTELWSDAPIRQ
GHIAGSVYLRFSGDPTLTQDDLKALFAHLQKQGITSIEGHLYLIGDKQEQLQAPGWVWDD
LGICFAAPVSSYIINQNCVYGQFAPSSAKHASEVKLRASSFGVKVSSDAIFSPKAGHDFC
QLDLVRLGQNQYHLRGCYPGSEAIPLAIAISDPEKFAMDTLTATLKGEISLSGKVKIGNT
IPSKAKLIASHSSAPLPELLKTMLLKSDNLIADSLFKRVGQNYYKAQGSFTHGAAAMRHI
LTELGIDLTNANIVDGSGLSRYNLLSAKQLADVLALIYQDARFHTLIDSLPEAGVSGTLQ
YRLGYTKPPLKHLVFAKTGSMQGVANLAGFMRLAQQRDILFVVLENGISPETKKQRKPAF
SADFLTRLLSAVETQTQTSQTTTTELSTVKLSD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacgcactcgataaacaaggatcagttacaggcatcattcactcgccccaagcttaag
ggattacttttaggcagcatgttaagtattctgctgccaacccaagcgattgcagcaatt
catccgctggatgagtcgacatttgccaagcaaatcgccgacattgccccgcgtcattcg
caagtcgctttgctggcccgtgatttaagtactaataccctgttatacagccagcaagcc
gataccttatttatccccgccagcacgcaaaaggtgctgaccgccgtgaccgctatggcc
agccttggcccagattttcgctatgtcactgagctctggagtgatgcgcccattcgccaa
ggtcatattgcgggcagtgtttatctgcgttttagcggcgatccaacgctgactcaggac
gatctcaaagccttgtttgcccatctacaaaagcaaggcataacaagcattgaggggcat
ctctatctgatcggggataaacaggaacaattacaagcacctggttgggtgtgggatgac
ctagggatttgctttgcagcgccggtatccagttacatcatcaatcaaaactgcgtttat
gggcagtttgcgccaagctcagccaaacatgcctctgaggtcaaattaagggcatccagt
tttggggtgaaagtcagtagcgatgccatattctcccctaaagcaggccatgatttttgc
cagctcgatttagtacgccttggccaaaaccaatatcatctacgcggctgctatcccggc
agtgaagcgataccactggcgattgccattagcgatcccgaaaaatttgccatggacacc
ctaaccgcgacgctcaagggggaaatatcactttcggggaaagtgaaaataggcaatacc
atcccttctaaggcgaaactgattgccagccatagcagcgcgcccttgcctgagctgtta
aaaaccatgctgttgaagtcggataacctcatcgccgacagtttgtttaagcgcgtgggg
caaaattattacaaagcccaaggcagctttacccatggtgctgcggctatgcgccatatt
ctgactgagcttgggattgatttaaccaacgctaatattgtcgatggttcagggctttct
cgctataacctgttgagcgcaaaacagttagccgatgtactggcgctcatttaccaagat
gcacgctttcacaccctcattgacagtttgcccgaggccggtgtcagcggcacactgcaa
tatcgcttgggatatactaaaccgcccttaaaacatctagtgtttgccaagaccggctcg
atgcagggcgttgccaatttagctggctttatgcgtttagcgcagcaacgggatattcta
tttgtggtacttgagaacggcattagccccgaaactaaaaaacagcgtaaacccgccttt
agcgccgattttttaactcggctgctgagcgctgtcgaaactcagactcagaccagccaa
acaacgaccacagagctgagcaccgttaagttaagtgattaa
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