Shewanella sp. MR-4: Shewmr4_3126
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Entry
Shewmr4_3126 CDS
T00388
Name
(GenBank) ABC transporter related
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
she
Shewanella sp. MR-4
Pathway
she02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
she00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shewmr4_3126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
she02000
]
Shewmr4_3126
Transporters [BR:
she02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Shewmr4_3126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Zeta_toxin
AAA_16
RsgA_GTPase
DUF87
NACHT
ATP-synt_ab
MMR_HSR1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABI40197
LinkDB
All DBs
Position
complement(3740296..3742047)
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AA seq
583 aa
AA seq
DB search
MKILLPFIRLFSHQWLMMAVGLVLTLTTLMAGIGLLSLSGWFLSATAVAGLTVIGSQSFN
FFTPAGGVRFLSIARTASRYGERLATHEATFKLLTELRVWAWRKLFPLSAKNLQGLRRAD
MLNRLVADIDTLDHLYLRLLTPMAASLLMTALLYLFLAWFDAKLALSLCLFLVVVWLLLP
LLFYRLGHEPSRNMLETKRQYRVQLLEMLQGQAELSLFGANARYRHKLDEAEQALFASQG
AMANITALSQAMLILATGSALIMMLFLAANGVGDAVPPGPMFALMVFATMACVEMMMPIA
GAFQHLSGCVLAATRIHEITEQESDIRFSEDSTLKATSGGLQMTDIHFGYHDNQSVLQGL
SLTVEPGQKVALLGATGCGKSSLLSLITREWQAQRGQICLDGQPLTDYSEAALRSAMTVV
SQRIYLYAGTLRENLAIALPVPEGQKRTANDERFIQVLQQVGLGELLKGDKPLDMWIGEG
GRQLSGGEQRRIGVARALLRDAPLLLLDEPTEGLDKRTEREILSLLLEFAKDKTLLMISH
RLTAMAKMDQIHLLAEGQIVASGDHQQLLQTCPAYQALYRRLA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactccttccctttattcggttgttctcccaccaatggttgatgatggccgtt
gggcttgtactcaccctaaccacactcatggcggggattggtttattgtcgctgtcgggt
tggtttttatcggcgacggcggtggcgggattaacggttatcggctcccaatcctttaac
ttttttactcccgcaggtggcgtgcgttttctttctatcgcgcgaacggccagtcgttac
ggtgagcgcctcgcgacccatgaggcgacctttaaattactgactgaactcagagtgtgg
gcgtggcgaaaactcttcccacttagcgctaaaaatctgcagggtctgcgccgtgcggat
atgctaaaccgcctcgtggcggatatagatacactcgaccatctgtatttacgattgttg
acgccgatggcggcttccttgctgatgacggcgttgttatatctgttcctcgcatggttt
gatgccaagctggccttaagtttatgcctgtttttagtggtggtttggctgctgctacca
ttgctgttttatcggcttgggcatgagccaagtcgcaatatgttggagaccaaacgccaa
tatcgggtgcagttgcttgagatgctgcagggccaagctgagctgagtttatttggtgcg
aacgccagatacagacacaagctcgatgaggccgagcaggcgttatttgccagccaaggg
gcgatggcgaatatcaccgccttgagccaagccatgctgatcctcgcgacaggctcggca
ctcatcatgatgctatttttagccgccaatggcgtgggcgatgccgtgcctcccggccct
atgtttgccttgatggtgtttgccactatggcctgcgtcgaaatgatgatgccaatcgcg
ggtgctttccaacatttgtcgggctgtgtgctggcggcgacacgaattcacgaaatcacc
gagcaagaaagcgatattcgttttagcgaagattcaacgcttaaggcgacatcgggcggg
ctgcagatgacggatatccattttggctatcacgataaccagagcgtactgcagggctta
tccttaacggtagagcccgggcaaaaggtggcgttattgggcgcaacgggctgcggtaaa
tccagtttattgtccttaatcacccgtgaatggcaggcgcagcgtggccaaatttgccta
gatggtcagccgctgacggactatagcgaggctgccttaagatcggcgatgacagtcgtg
agccagcgaatttacctgtacgcgggcacgctgcgggagaaccttgctattgccttgcct
gtgccagaagggcaaaagcgtaccgctaatgacgagcgttttatccaagtattacagcag
gttggtttaggcgaattacttaaaggcgacaagcctctcgatatgtggattggtgagggc
ggccggcagttatcgggcggtgagcagcgccgtattggcgtggcaagggcattgctccgt
gatgcgcctttgttactgttagatgagccaaccgagggcttagataagcgcaccgagcgg
gagatcttaagtttactgcttgaattcgcaaaggataaaaccctgctaatgatcagccat
cgattaacggcgatggccaagatggaccaaattcacctcctcgccgaggggcaaattgtg
gcatcgggcgatcatcagcagttacttcaaacttgccccgcctatcaggcgctctatcgt
cgcttagcttaa
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