Shewanella sp. WE21: CKQ84_07735
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Entry
CKQ84_07735 CDS
T05404
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
shew
Shewanella sp. WE21
Pathway
shew03030
DNA replication
shew03430
Mismatch repair
shew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKQ84_07735
03430 Mismatch repair
CKQ84_07735
03440 Homologous recombination
CKQ84_07735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shew03032
]
CKQ84_07735
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_07735
Enzymes [BR:
shew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKQ84_07735
DNA replication proteins [BR:
shew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKQ84_07735
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKQ84_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
PglD_N
HSP20
DUF2807
Motif
Other DBs
NCBI-ProteinID:
AVI65794
UniProt:
A0A2R3EUX7
LinkDB
All DBs
Position
1812647..1813747
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSIDRDALLKPLQLVCGAVERRHNLPILSNLLVEVSGHSLKLTGTDLEVELVGQAVVH
GDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNVE
AFQAEIEFSLKQGVLKSIIDSTQFSMANQDVRYYLNGLLFETEGNVLRAIATDGHRLALS
HRTIEAQLPEKQVIVPRKGVIEMARLLESDDLDITIAIGDNAIRATTANTVFTSKLVDGR
FPDYRRVLPKGGDKIVIASRNHLKQALTRASILSNEKFRGVRIQLENGLLKITANNPEQE
EAEEIIDVEYNNQALEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALIENHLEEDSMYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcaattgatagggatgccctattaaagccgttgcaattggtgtgtggtgcg
gtagaaagacgccataacttgcccattttgtctaacctccttgtagaagtaagtggtcac
tcacttaagctgactggtacagatttagaggtcgaactcgtgggccaagctgtggttcac
ggtgatatcgaagaaggtcgtactacggttccggcgaagaaactgctcgatattgttaag
tctttgccagaacaaagcgaactgaaagtcgaacaacaagataataaatggttgctgcgt
tcaggccgtagccgtttttccttagcgacgttgcccgcagaagaataccccaatgttgaa
gccttccaagctgagattgaatttagcttgaagcagggcgtgttgaagtcaattatcgat
tcgacgcagttttcgatggctaaccaagatgtacgctattacctcaacggtttattgttt
gaaactgaaggtaatgtgttgcgtgcgatagcgaccgacggccatcgtttagccttaagt
catcgtacgattgaagcacaattaccggaaaaacaagtcattgtgcctcgtaaaggcgta
attgaaatggcgcgcttattggagtctgacgatctcgatatcaccattgctattggtgat
aatgctattcgtgctaccacggctaacacagtatttaccagtaaattagtcgatggccgc
ttccctgattatcgccgtgtattgccaaagggcggtgataaaattgtgattgcgagtcgt
aatcacttgaagcaagcgctgacgcgggcttctattttatccaatgaaaaattccgtggt
gtgcgtattcaactcgaaaatggtctgctcaagatcaccgctaataatcctgaacaggaa
gaagcggaagaaatcattgatgtggaatacaacaatcaggccttagaaattggttttaac
gtcagttatttactggacgtgctcaacaaccttaagtccgatgatgtgcgtatcacgctc
attgatggtaactccagcgccctaatcgaaaaccatttggaagaagattccatgtatgtg
gttatgccgatgcgcttataa
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