KEGG   Shewanella sp. WE21: CKQ84_19535
Entry
CKQ84_19535       CDS       T05404                                 
Name
(GenBank) transcriptional regulator HexR
  KO
K19337  RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
shew  Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:shew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:shew03000]
    CKQ84_19535
Transcription factors [BR:shew03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    CKQ84_19535
SSDB
Motif
Pfam: HTH_6 SIS SIS_2 HTH_Tnp_ISL3 MarR HTH_24 HTH_29 Penicillinase_R HTH_Crp_2 DUF3640
Other DBs
NCBI-ProteinID: AVI67844
UniProt: A0A2R3F0P5
LinkDB
Position
complement(4383892..4384746)
AA seq 284 aa
MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSTESYTTKIFESSMASLDTARQSLDISAINK
AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR
LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDPIL
NT seq 855 nt   +upstreamnt  +downstreamnt
atgaataccctagaaaaggttcaaaaaagcctcacccattttagtaaatcagaacgcaaa
gttgcagaggtgatcttagcatcaccacagacagctatacattctagcatcgccacactg
gctaagatggcagatgtcagtgaacctactgtgaatcgtttctgccgccgcttagatact
aaaggtttccctgattttaagttacatctagcgcaaagtcttgcgaacggtacaccttat
gtgagccgccacgttgaagaagatgattcgactgagtcttatacgacaaaaatattcgaa
tcttcaatggcttcgctcgataccgcacgtcaaagcctagacatttcagccattaataaa
gccgttgatattctcactcaagctaagactatttccttttttggcctaggcgcatccgct
tcagttgcccatgacgcgcaaaataaattcttccgctttaatgtccctgtcatctgtttt
gacgatgttctaatgcaacgcatgagctgtattaacagtaatgagggcgatgtggtggta
ttgatttcccacactggccgtactaagtcattgattgaaatcgcgcgtttagcgagagaa
aatggtgcagctgtgattggtattaccgcccgcaactcgcctttgtcaatggaatgtaca
ctgcccgtgacaatggaagtgccagaagatactgacatgtatttacctatggcctcgcgt
ttagcccaattagtcactatagatgtattggcaacgggttttaccttacgtagaggccca
cgtttccgcgataatttgaaacgagtgaaagaagtgttaaaagagtctcgcatcaataaa
gatccgatactgtaa

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