Shewanella sp. WE21: CKQ84_20560
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Entry
CKQ84_20560 CDS
T05404
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_20560
Enzymes [BR:
shew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
CKQ84_20560
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKQ84_20560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
MTS
PrmA
tRNA_U5-meth_tr
TRL
Motif
Other DBs
NCBI-ProteinID:
AVI68025
UniProt:
A0A2R3F101
LinkDB
All DBs
Position
complement(4610483..4611490)
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AA seq
335 aa
AA seq
DB search
MSIQTLLSTALAKRHDFLQQAEQDQTDCFRVFHGTVEGVSGLNVDRYGDAWLVQSFHQTL
TDEELADVSAVLLQQADLPIVYNDRSLGHSRVLNALSPALTEIASSERVMQENGIKFSTK
LRHEGQDPLLFLDMRIGREYVRAHSQDKTVLNLFSYTCGIGTAAAIGGATQVMNVDFSSF
ALATGKANAALNQVSNVCEFVQSDAFPALRQLAGLSVGGRRNQKLPSYPKLAQTQFDLVF
LDPPRYAKSAFGIVDLVNDYQGLFKPALMATKVGGTIVCCNNVAKVERQAWFDSLVRCVE
KQGRTVTTYTWLYPHEDFPSFDDNHPLKIVALTLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcaaacgctgttatcgacggctctggcgaaacgccatgattttttacaacaa
gcagaacaggatcaaaccgattgttttcgggtgttccatggcacagttgaaggcgtgagt
ggcttgaatgtcgatcgctacggcgatgcttggctagtgcagagttttcatcagacctta
accgacgaagagttagccgatgtgagcgctgttttgctgcaacaggccgatttaccgatt
gtgtataacgaccgctcattaggccattcccgcgtattgaacgcgttatcacccgcactg
acagagattgcgagttctgagcgagtaatgcaggaaaatggcatcaagttcagcactaaa
ctgcgccacgaaggacaagatccgctgttattcctcgatatgcgtattggccgcgaatat
gtgcgggcacacagccaagataaaactgtgctgaatttgttttcctacacctgcggcatt
ggtactgcggcagccatcggcggcgcgactcaggtgatgaatgttgatttttcttccttt
gctttagcgacgggcaaagcgaatgcggcattaaatcaggtgtcgaatgtatgtgagttt
gtgcagagtgatgcgtttccggcattgcgccaattggcaggcttgagtgtgggagggcgc
cgcaatcaaaaattaccgagttatcccaaattggcgcaaacccagtttgatctggtgttc
ctcgatccgccgcgttatgccaagagtgcttttggtattgtcgatttggtcaatgattat
caaggtttgtttaagcccgcattaatggcgacgaaagtcggtggcactatcgtttgctgt
aacaatgtggcgaaagtcgagcgccaagcatggttcgacagtttagtgcgctgcgttgaa
aaacaaggccgtacagtcactacgtacacttggctctatccccatgaggatttcccttcg
ttcgatgacaatcatccacttaaaatagtggcactgacattaagttaa
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