Shewanella sp. FDAARGOS_354: CEQ32_06330
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Entry
CEQ32_06330 CDS
T04944
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shf03021
]
CEQ32_06330
Transcription machinery [BR:
shf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEQ32_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_24
DUF6589
Motif
Other DBs
NCBI-ProteinID:
ASF17582
LinkDB
All DBs
Position
1397521..1398117
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AA seq
198 aa
AA seq
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METDNHNLIADEHKTDADPLVSAIIKVANQRDKAAFGYLFSHFMPKIRAFGLQRLNQQGL
AMDLVQETMTIVWTKSHLYNADKGSVATWVFTIMRNQCFDMLRRVQHNREDAFGDDIWPL
YDVAVSQDNNPDHKLTAKLLAHLDALPLAQRQVVQGIYMQELTQQELADALKVPIGTIKS
RLRLGLEKLKSFLETQHD
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgataaccataatttgattgccgatgagcataaaacggatgcagatccctta
gtgagcgccatcatcaaagttgctaatcaacgggacaaagcggcatttggctatttgttc
agtcactttatgcccaaaattcgggcatttggtctgcaacgattaaatcaacaaggcctc
gccatggatttagttcaagaaacgatgaccatcgtttggactaaatctcatttatacaat
gcagataaaggttctgtcgcaacatgggtatttaccattatgcgtaaccaatgcttcgat
atgcttagacgagtacagcacaatcgtgaagatgcatttggcgatgatatctggccactg
tatgacgttgcggttagccaagataacaaccctgaccataaattgaccgccaagttactc
gctcatttagatgccctgccccttgctcaacgtcaagtagtacaaggcatttatatgcaa
gaactcacccagcaagaattggctgatgccttaaaagtccccattggcaccattaaatcg
cgactcagattggggttagaaaagcttaaaagctttttggagacacaacatgattaa
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