Slackia heliotrinireducens: Shel_09390
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Entry
Shel_09390 CDS
T00981
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shi
Slackia heliotrinireducens
Brite
KEGG Orthology (KO) [BR:
shi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shi03016
]
Shel_09390
Enzymes [BR:
shi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Shel_09390
Transfer RNA biogenesis [BR:
shi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shel_09390
Prokaryotic type
Shel_09390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACV21980
UniProt:
C7N4Z5
LinkDB
All DBs
Position
1084341..1085345
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AA seq
334 aa
AA seq
DB search
MKRGESGLSLVVGVDKPKGMSSHDVVNRCRRIFGERRVGHTGTLDPLATGALAVCIGPAT
RLDAYFVNHDKVYDVRIAFGTATDTDDRCGQVIRTAEVPPELSDETQARAFLFTCLGKQL
QTPPQYSAIKRDGKRAYEAARAGNVVELDAREITVYAADLLQTGRTEDGVLFWDVRFGVS
KGTYIRSLARDIGVRLGTAAHVSELRRIEAGGLHVDQCVTLEELEAAGPKAAIDPVRLLG
FRTAFLNERQQADVANGKRLPAKTLQLFEAPRNDQGDCCMTAHAKRSSAPLADGETISMV
AGNTLVALYSAQVNRGMVSPCCVFAQGVYRGSNI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtggggaaagcggcctgtcgcttgtagtgggcgtggacaagcctaaaggcatg
agttcccatgacgtggtcaaccggtgccgccgcatcttcggcgagcgccgcgtgggccat
accggaacgctcgaccctttggcaacgggcgccttggcggtgtgcatcgggcctgctacc
aggcttgacgcgtacttcgtcaaccacgacaaggtctatgacgtgcgaatagccttcggt
acggcaaccgacaccgacgacaggtgcggccaggtcatccgtacggccgaggtgccgccc
gagctgtctgacgagacccaggccagagcctttctcttcacatgtctgggcaagcagctg
cagacgccgccgcagtattcggccatcaaacgcgacggcaagcgcgcctacgaggccgcc
cgtgccggcaacgtcgtcgagctggatgcccgcgagattaccgtgtacgccgccgacctg
ctgcaaacgggccgcaccgaggacggcgtcctgttctgggacgttcggttcggcgtttcc
aaggggacgtacatccgctcgctggcccgggacatcggagttcgtctggggacggccgcc
cacgtgtcggagcttcgccgcatcgaggcgggcgggctgcatgtggaccagtgcgtgact
ctggaggagctggaggccgcaggcccgaaggcggccatcgatcccgtgcggctgctgggc
ttccgcacggcgtttctcaacgagcggcagcaggccgacgtggccaacggaaagcgtctg
cctgcgaagaccctgcagctgttcgaggcgccccggaacgaccagggcgattgctgcatg
acggcacacgccaaacggtcgagtgcgcctttggcggacggcgagaccataagcatggtc
gcaggcaatacattggttgccctctattccgcacaggtgaatcgtggtatggtttcaccc
tgctgcgtctttgctcaaggagtgtatcgtgggtctaatatatag
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