Spiroplasma helicoides: SHELI_v1c11300
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Entry
SHELI_v1c11300 CDS
T04620
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
shj
Spiroplasma helicoides
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shj03016
]
SHELI_v1c11300 (gidA)
03036 Chromosome and associated proteins [BR:
shj03036
]
SHELI_v1c11300 (gidA)
Transfer RNA biogenesis [BR:
shj03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SHELI_v1c11300 (gidA)
Prokaryotic type
SHELI_v1c11300 (gidA)
Chromosome and associated proteins [BR:
shj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SHELI_v1c11300 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Trp_halogenase
Pyr_redox
AlaDh_PNT_C
NAD_binding_9
DAO
FAD_binding_3
Thi4
Pyr_redox_3
ThiF
UDPG_MGDP_dh_N
Phage_RpbA
Motif
Other DBs
NCBI-ProteinID:
AOG61077
UniProt:
A0A1B3SMD4
LinkDB
All DBs
Position
complement(1293358..1295229)
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AA seq
623 aa
AA seq
DB search
MQADVVIVGAGHAGVEAALACARLGKKTIIVNLYEDKIATMPCNPSIGGPAKGIVVREID
ALGGEMAKAADATALQMKLLNSSRGPGVWALRAQSDKIKYSKYMREVIKKQTNLELVVGE
VSDIELDENNNVKSVFLSDKRQIITNAVVLTTGTYLSSLIYRGSEKFESGPNSEKTTKYL
SDTFKKLGINSFRFKTGTPPRVLKNSIDLSYAALEPGTNKELAFSFSTKSFVPYEKQQPC
YLIHSTKETKEIIENNLNKSAMYSGEINSVGPRYCPSFEDKIVRFNKKETHQIFLEPESL
DLDTFYVQGFSTSMPIDVQEQMLRSLPGFKNVVVDKWAYAIEYDCIDPQQLKLSLELQKV
GGLFTAGQINGTSGYEEAAGQGLIAGINACRKIDNLEPLILKRSESYIGVMIDDLINKGV
VEPYRLLTSRAENRLTLRNDNAEIRLKEYGHKIGLVSDEEYKRFLKYKEEMHSTINILKE
TRFLPKSDLANELRILQQADLKQGLSGYEILKQPKVDINIIKKYVKEMESLTDNQLQNIL
IDIRFEGYIKKENETIDRFNKLEKKQIPDDIDYAKVENIAVEAKQKLEKVKPKSIGQASR
ISGVNPADIQMLLFYLRKNYNKI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatgtagtaattgttggtgctggtcatgcaggagttgaagcagctttagcg
tgtgcaagacttggtaaaaaaacaataattgtaaacttgtatgaagacaagattgcaacc
atgccatgtaatccatcaattggtggaccagccaaaggtattgttgttagagaaatcgat
gcacttggtggcgaaatggcaaaggctgccgatgccacagctttacaaatgaaattatta
aactcttctagaggacccggtgtttgagcattaagggcacaatctgacaaaattaagtac
tcaaaatatatgcgtgaagttattaagaaacaaacaaatctagaattagttgttggtgaa
gtttcagatattgaattagatgaaaataataatgttaaatctgtttttttatctgataaa
agacaaattataactaatgcagtagttttaactactggaacatatttatcaagtctaata
tataggggatcagaaaagtttgaaagtggtccaaatagtgaaaaaacaacaaaatattta
tcagatacttttaaaaagttaggtattaattcttttagatttaaaacaggaacaccccca
agagttttaaaaaattctattgatttatcatatgcagctttagaaccaggaaccaataaa
gaacttgctttttctttttcaacaaaaagttttgtaccttacgaaaagcaacaaccctgt
tatttaattcattcaaccaaagaaacaaaagaaataattgaaaataatttaaataagtct
gcaatgtattctggagaaataaattcagttggcccaagatattgtccaagttttgaagat
aaaattgttagatttaacaaaaaagaaacacatcaaatatttttagaacccgaatcttta
gatttagatacattttatgttcagggattttctacatcaatgcctattgatgttcaagaa
caaatgctaagaagcttgccagggtttaaaaatgtagttgttgataaatgagcatatgca
attgaatatgattgtattgatccacaacagttaaaattatctttagaactacaaaaagtt
ggaggtctatttacagcaggtcaaataaacggaacaagtggttatgaagaagctgctggt
caaggtttaattgctggaataaatgcatgtcgcaaaattgataatttggaacccttaata
ttaaaaagaagtgaatcttatattggtgttatgatcgatgatttaattaataaaggtgtt
gttgaaccatataggcttcttacaagtagagctgaaaaccgactaactctaagaaatgac
aatgcagaaattaggttaaaagaatatggacataaaattggtttagtttctgatgaagaa
tataaaagatttttaaaatacaaagaagaaatgcattcaactataaatattttgaaagaa
acaagatttttgccaaaatcagatttagcaaatgaactaagaattttgcagcaagctgat
ttaaaacaaggattaagtgggtatgaaatattaaaacaaccaaaagttgatataaacatc
attaaaaaatatgtaaaagaaatggaatctctaacagataatcaactacaaaatatacta
atagatattagatttgagggttacattaagaaagaaaacgaaaccattgaccgttttaat
aaattagaaaaaaaacaaataccagatgatattgattatgcaaaagttgaaaatattgca
gttgaggcaaagcaaaaactagaaaaagttaaaccaaaatccataggccaggcttctaga
ataagtggtgtaaatcctgcagatattcaaatgcttttattttacttaagaaaaaactac
aacaagatttaa
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