Shewanella halifaxensis: Shal_0807
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Entry
Shal_0807 CDS
T00654
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00630
Glyoxylate and dicarboxylate metabolism
shl00680
Methane metabolism
shl01100
Metabolic pathways
shl01120
Microbial metabolism in diverse environments
shl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shal_0807
09102 Energy metabolism
00680 Methane metabolism
Shal_0807
Enzymes [BR:
shl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shal_0807
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4_6
DAO
Fer4
FAD_oxidored
Fer2_4
HI0933_like
Amino_oxidase
Fer4_9
FAD_binding_2
NAD_binding_7
Fer4_8
Thi4
Fer4_10
FAD_binding_3
GIDA
Fer4_2
AlaDh_PNT_C
FMO-like
Fer4_18
Fer4_15
Lys_Orn_oxgnase
Fer4_16
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
ABZ75382
UniProt:
B0TTN9
LinkDB
All DBs
Position
complement(1003743..1008068)
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AA seq
1441 aa
AA seq
DB search
MKQIIIDGKTLVANQRDTLLDVALNADIAIPNLCKSNARSLIKSSLVNDSKQHCNLCHVE
LIASDNSITNVRACETLIGDIAMQNVEVITRSAALSKQRKAALHTILSDHFADCEAPCQT
ACPAGVDVQSYLYHIAQGDHTEAVKVIKQTLPLPLSIGRVCPAFCESECRRGLVDEPVAI
RQLKRHAADLDLDDANPYVPPKAPATNKKVAIIGSGPAGISAGYYLSNNGHDVTIFESMP
QAGGWLRYGIPEYRLPKAILDKEIELLCKNGLNIQTDTRLGRDIHLNGLIEDFDAVCLAI
GAQKAVPMNYPGIELKGCYLGVDYLKDYCTNKQYSTGKKVAVIGGGNTAIDCARTAKRDG
ADVTLVYRRTRDEMPAEPYEIHEAEQEGIKFHFLTNPIENHSDEAGRVSSVTFEVMALGE
PDSSGRRSPTPTGETFVEAFDTVIPAVSQTPDMEFLEHPQSQLATGAVALTRWNTFEGCE
HTMSAGQSAGLDKLFVIGDSRTGPATAVAAVADGRKAADAIEKLLTQGLTCELVKQPFNS
TKAAKTSALKSLKVDALYPSTKVQARSQMPELDKLQRALNFSEVELGFEADEAMKEAARC
LECACQANTDCKLRDYATEYKVKASELDISQAQHFSIDSSAPFITFDANRCISCGACVET
CKGASGHNAISFAKDHYQAIPISCASSCDSSYDSDERKAPRVGFSASMNDSDCVQCGNCV
QVCPTGALVDARDKTQGLTPAQKAPLKTVSTICTYCGIGCRINMQVDEQKNQIRHIDGDI
SSPVNEGMLCVKGRFGFDFVGSDKRLTTPLIRKNGELVPASWDEAISVVAQRFSEIKHTY
GDKALAGLSSAKATNEDNFVFQKFFRSVLGNNNIDHCARLCHASTVTALRESIGSGAMTN
DIPSIKDSDLIFIIGSDTESAHPIIASRIKQAVTDHGARLMVADPKRVSIADKAQLYVAQ
RPGSDVMLLNAIMQQIIKNDWHDLDYIQARVEGFSQLYDEVMSTDYSPKNAELITGVSAS
DIIEMARLIGTAEKTAIYYAMGVTQHTSGHDNVTAISNLQLLCGNIGVKGAGINPLRGQS
NVQGACDMGALPNYFSGYQKLDDPLVQMRFRDAWGKEDLCADIGFSATEMMHALTHGELK
GLYVMGENPVLSDPDQKHVLQGLAAAEFVVVQDIFLTETAELADVVLPAAAFAEKLGHFT
NTERRVQQLLPAVTPPGLAKNDWEIIQLIAVQMGEEWTYQNERQIWHEITDVTPQYRGIT
WKVIDSLTANGRLGLQWPCPAEGHPGTPILHTNQFTHGKGKMRAVHYRLPAEMPCEEYPL
VLSTGRLLEQFHTGTMTRKTPGLNLLGSPRVMISVYDAEKLSVNNGDMLKLSTRRGEIEI
QAFVTKRAQAGVLFLPFHFAESAANKLTNNALDPVAKIPEFKVCAVKAEKVAEKLAEAEL
V
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataataattgatggcaagaccctagtagccaatcaacgagacactctgtta
gacgtcgcgcttaatgccgatattgccattcctaacctgtgtaagagcaatgcccgttct
ttaataaagagctctttagttaatgacagcaagcaacactgtaatctttgccatgtagag
ctcattgctagcgataatagtattaccaatgttcgtgcctgtgagacccttattggcgat
atcgcaatgcagaatgttgaagttatcacccgctctgctgcgctcagtaaacagcgaaaa
gcagccctgcatacgattttatcagatcactttgccgactgcgaagcgccatgccaaacg
gcttgcccagctggcgtggacgtacaatcttatctgtaccatatcgctcagggcgatcac
accgaagccgttaaagtcattaagcaaaccttacccctgccactttctattggccgtgtt
tgccccgctttttgtgagtctgagtgtcgtcgtggcctagtcgacgaacccgtcgctatt
cgccaattaaagcgccacgccgccgacttagatctcgatgatgccaacccttatgtaccg
ccaaaagcgcctgcgaccaataagaaagtcgccattatcggtagtggccctgcgggtatt
tcagctggctattacctgtctaacaatggccatgatgtcacgatttttgagtccatgccg
caagcgggtggttggttaagatacggtattccagagtatcgcctccccaaggccattctc
gataaagagatcgagcttctctgtaaaaacggtctaaatattcaaactgatactcgtctt
ggccgcgatattcacctcaatggtttgatcgaagattttgatgccgtctgtttagccatt
ggcgcccaaaaggcggtaccgatgaactacccaggcatcgagctaaagggctgctattta
ggggtcgattacctcaaagattactgcaccaataagcaatacagcactggcaaaaaggta
gcggtgattggtggcggtaacacagccatcgattgtgcccgcaccgctaaacgtgatggc
gccgacgtgaccttggtgtatcgtcgtactcgcgacgaaatgccagcagagccctatgaa
attcacgaagccgagcaggaggggattaagttccacttcctcaccaacccgattgaaaac
cacagcgatgaagcgggccgagttagcagcgttacctttgaagtgatggcactgggtgaa
cccgatagctctgggcgccgctcaccaacaccgacaggcgagacctttgtcgaagccttc
gatacggttattcctgccgtatcacaaactccagacatggagtttcttgagcatcctcag
agccagttagccaccggagctgtcgccctaactcgctggaatacctttgagggttgcgag
cacaccatgtctgcgggtcagtctgccggccttgataagctgtttgtgattggtgactca
agaacgggccccgctaccgcggttgctgctgttgccgatgggcgcaaggcggcggatgcc
attgagaaattactcacacaaggcctaacttgtgagttagtaaagcagccttttaattcg
accaaggcggctaaaactagcgcactgaaatcacttaaggtggacgcgctttatccatcg
actaaggtacaggctcgtagccaaatgcctgagcttgataagctacaacgtgcgcttaac
tttagcgaagtggagcttggctttgaagccgatgaggcgatgaaagaagcggcgcgctgc
ctcgagtgtgcctgtcaggccaacaccgactgtaagctgcgtgattacgctaccgagtat
aaggtcaaggctagtgagctcgatataagccaagcacaacactttagtatcgacagcagc
gcaccatttatcaccttcgatgctaaccgctgcattagctgtggcgcctgtgttgaaacc
tgtaaaggcgctagcggccataacgcgatctcttttgctaaagatcactaccaagctatc
cctatctcatgtgctagctcatgtgacagctcatatgacagtgatgagcgcaaagcgccg
cgtgtaggctttagcgccagcatgaatgacagcgattgtgtgcagtgtggtaactgcgta
caggtttgcccaacgggcgcactggttgatgctcgcgataaaacccaaggtttaacgccg
gcacaaaaagcaccgcttaaaaccgtctctaccatctgtacttactgcggtattggttgc
cgtatcaacatgcaagtggatgagcaaaagaaccaaattcgccatatcgatggtgatatc
tcatcgccggtaaacgaggggatgctgtgtgttaaaggccgctttggctttgactttgtc
ggcagtgataagcgcctgaccacaccacttattcgtaaaaatggtgagctagttccagca
agctgggacgaagctatctctgttgtggctcagcgctttagcgagataaaacacacctat
ggtgataaagcactagcggggctatcgtcagctaaagccactaacgaagataacttcgta
ttccaaaagttcttccgcagcgtgctgggtaataacaacatcgatcactgcgctcgttta
tgtcacgcatcaacggttactgcacttcgcgaaagcataggtagcggtgcgatgaccaac
gatattccaagcattaaagatagcgaccttatctttatcattggctcggacaccgaaagc
gctcacccaattattgcctctcgcatcaagcaggcagtaaccgatcatggcgcccgcttg
atggttgccgatccaaaacgcgtctctatcgccgataaagcccagctttatgtggcacaa
agaccgggttcggatgtgatgctactgaacgccattatgcagcagatcatcaaaaacgac
tggcatgacttagattacattcaagcgagagtcgagggcttcagccagctctatgatgaa
gtgatgagcaccgattacagccctaaaaatgctgagctcattactggcgtcagcgccagt
gacatcattgagatggctcgactgattggcaccgctgaaaaaaccgctatctactacgcc
atgggcgtgactcaacatacctcgggtcacgacaatgtcacggctatctctaacctgcag
ctattgtgcggcaacataggggtaaaaggcgcaggcattaacccactgcgcggccagagt
aacgtgcaaggtgcctgcgatatgggcgcactgccaaactacttcagtggctaccagaaa
cttgacgacccactagtacagatgcgcttccgtgatgcttggggcaaggaagatctctgt
gcagatatcggattctctgcaaccgagatgatgcatgccctgacccatggcgaactgaaa
ggtttgtatgtgatgggtgaaaacccagtgctcagcgacccggatcagaagcatgtactg
cagggcttagccgcagcagaatttgtcgtggtgcaagatatcttcttaaccgagaccgcc
gagcttgccgatgtggtgttacctgctgcggccttcgccgaaaagctaggccacttcacc
aataccgagcgccgagtacagcaattattacccgctgtaactccgccggggcttgctaaa
aatgactgggagatcatccagctaattgccgttcagatgggtgaagagtggacataccaa
aatgagcgacagatttggcatgagatcaccgatgtgactccgcaatatcgcggtattact
tggaaagtgatcgatagcttaacggcaaatggtcgtctaggcctgcaatggccgtgtccg
gctgaaggtcaccctggcacgcctattttgcataccaatcagtttactcatggcaaaggt
aagatgcgtgctgtgcattatcgcctgccggcagagatgccatgtgaggaatacccactg
gtattatcgacgggccgtttgttggagcagttccatacaggcaccatgactcgcaagact
ccaggcttaaacctgcttggatctccaagagtgatgatttcagtctatgacgctgaaaag
ctaagtgtgaataacggtgatatgctcaaactcagcaccagacgcggtgagattgagatc
caagccttcgtcactaaacgtgcacaagctggggtattgttcctaccgttccactttgcg
gaatccgcggccaataagctcactaacaacgccctcgaccctgtggcgaaaatcccagag
tttaaggtgtgtgccgtcaaagcggaaaaagtggctgagaagctagccgaggcagaactc
gtctag
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