Shewanella halifaxensis: Shal_1232
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Entry
Shal_1232 CDS
T00654
Name
(GenBank) recA protein
KO
K03553
recombination protein RecA
Organism
shl
Shewanella halifaxensis
Pathway
shl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shal_1232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_1232
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Shal_1232
RecFOR pathway proteins
Shal_1232
TLS (translesion DNA synthesis) factors
Other SOS response factors
Shal_1232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_24
ATPase_2
AAA_25
AAA_16
CbiA
AAA_35
PAXNEB
AAA_22
CobU
MobB
AAA_14
AAA
DnaB_C
TK
Motif
Other DBs
NCBI-ProteinID:
ABZ75801
UniProt:
B0TK14
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All DBs
Position
1497704..1498771
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AA seq
355 aa
AA seq
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MKTDPNKEKALNAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMG
RIVEIYGPESSGKTTLTLEVIAAAQKQGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
DTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDREEVIG
NETRVKVVKNKIAAPFKQAEFQILYGQGINSTGELVDLGVQHKLIEKSGAWYAYKGNKIG
QGRANAGKYLIENPEVSDEIETTLRAMLLGNGEKIAPDAADTAGDNVDLETGEVF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagatccaaataaagagaaagcactgaacgcagttttaagccagattgagaag
cagtttggtaaaggctcaatcatgaagctaggcgaagaccgttcaatggacgtagaaacg
atttctactggctcattatctttggatgttgccttaggcgctggcggattgcctatgggt
cgtatcgttgaaatctacggtccagaatcatcaggtaaaactacactgacactagaagtt
attgcagcggctcagaagcaaggtaaaacctgtgcctttatcgatgctgagcatgcacta
gacccgatttatgcgaaaaagctaggtgtggatatcgacaacctactttgttctcagcct
gatacgggtgaacaagctcttgaaatttgtgatgcattaacacgcagcggcgcagttgac
gttatcgttgtcgactcagtagcagccttgacaccaaaggctgaaattgaaggcgagatt
ggcgactctcacatgggccttgcggcgcgtatgatgagccaagcaatgcgtaagcttgcg
ggtaaccttaagcagtcaaatactctgcttatctttattaaccaaattcgtatgaagatt
ggtgttatgttcggtaatcctgaaacgactactggcggtaacgcacttaagttctacgct
tcagttcgcttagatatccgccgtactggtgcgattaaagatagagaagaagtgataggt
aacgaaacccgcgttaaagtggttaagaacaagattgctgcaccattcaagcaagccgag
ttccaaattctttacggacaaggtattaacagtaccggcgagctagttgaccttggtgta
cagcataaactaattgaaaaatcaggtgcttggtatgcttataaaggtaacaagattggt
cagggccgtgcaaacgcgggtaaatacctaatcgaaaaccctgaagtgtctgacgaaatt
gaaacgacactacgcgctatgctgttaggcaatggtgagaaaattgctccagatgctgca
gatacagccggtgacaacgttgacttagagactggcgaagttttttaa
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