Shewanella halifaxensis: Shal_3326
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Entry
Shal_3326 CDS
T00654
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shl03009
]
Shal_3326
Ribosome biogenesis [BR:
shl03009
]
Prokaryotic type
ribosomal protein modification factors
Shal_3326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
ABZ77872
UniProt:
B0TRW0
LinkDB
All DBs
Position
complement(4060657..4062843)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDIPTENIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDRQGILRSIERCTVKKVVQT
GPEFKIETVENLDADANAMLMGQDDSDASTYILGKDLPLEQTIANMTGMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELTDDDSLPTGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGIC
TIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEI
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSIEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNQEEADGLFGILETLEKEVYTAEFDQLGASACRMLVPGFSEVY
LVDDLIWDNTNKALDYREDILNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDEN
TVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTVERGLFYQAVNAVLEVEMDDE
LELEHFIHSFNRMFGEDVMQNVIGSVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
ARAKVAAK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaactttctcgacaacttgagactcgaagccaagtttgacgacttc
accgttacggccgaccagcctattcgctacaaaggcgatggctctgcaccaagtcctttc
gattacttcttagcatcgtcagcactgtgtgcggcttactttatcaaggtgtactgcaaa
gctcgcgatattcctactgaaaacattcgtttgtcgcagaacaacattgtcgatcctgaa
gatcgctataaccagattttccagattcaagttgagctaccagaggatatttcggataaa
gaccgtcaagggattttgcgctcgattgagcgttgtaccgtgaagaaagtggtacaaacc
ggaccagaatttaagattgaaaccgttgaaaacctcgatgccgacgctaacgccatgttg
atgggtcaagacgacagcgacgcgagcacctatatcttaggtaaagacctaccgcttgag
caaaccattgccaacatgacgggtatgttggctgacttaggcatgaaaattgagatctca
tcttggcgcaatatcgtgccaaacgtgtggtcactgcatatccgtgatgcggcctctcct
atgtgttttaccaatggtaaaggcgcgacgaaagagagcgcgttatgctcggcattaggc
gagtttatcgagcgtctaaactgcaacttcttctataacgatcagttcttcggggaagag
atcgctaacagtgagtttgtgcattacccgaacgagaaatggttcgagcttacagatgat
gactcattgccaacgggcatgctagatgactattgtctagctatctataacccagagggt
gagctaggtggttcgaaccttatcgataccaattcgggtaatatcgaccgtggcatctgt
accattccctacacgcgtcactcagatggcgaaaccgtgtatttcccatcgaacctgatt
gaaaacttattcttaagtaacggcatgagcgcgggtaacaacctgcaagaagcgcaggtt
cagtgtctgtctgaaatttttgagcgcgcggttaagcgccaaatcattgagcaagaaatc
gtactgccagatgtaccgatgcaagtgctagaaaagtacccaagcattcttgcgggcatt
aacggtctagaagagcagggtttcccagtcgtagtgaaagacgcatcacttggtggtcaa
ttcccagtgatgtgtgtaacgctaatgaacccgaaaactggtggcgtatttgcctcgttt
ggcgcacacccaagtttcgaagtggcactggagcgtagcttaacagagctgctacagggt
cgcagcatcgaaggtttaaacgatgtacctaagccaacgttcaacagcatggcggtgact
gaacctgaaaacttcgttgagcactttatcgactcaacgggcgtgatctcttggcgcttc
tttagcagcaagcatgactatgagttctgtgagtgggatttctcgggtactaaccaagag
gaagccgatggcctattcggcatcttagaaaccttagagaaagaggtttacaccgctgaa
tttgaccagcttggcgcatcggcttgtcgtatgctggttccgggcttctctgaagtttac
ttggtggatgacctgatttgggataacaccaacaaggcgcttgattaccgtgaagatatt
ttaaatctacactcactgtctgatgatgagctggtggacttggttaatcgtctagaagag
agccagctagataactacaccgacattcgcaccatgatcggcatcgtcttcgatgaaaat
accgtttggggtcagctaaccattatcgagcttaagatcttaatctatctagcacttggc
gcagctgaagaagcgatggagcttgtgggtgatttcctacagtacaacgacaacacggtt
gagcgcggtctgttctaccaagcggttaatgcggtacttgaagttgaaatggacgacgag
ctagagcttgagcactttatccatagcttcaaccgtatgtttggtgaagatgtgatgcaa
aacgtcatcggttcggtgagcggtgaagtgcgtttcttcggcctaaccaagaccagcatg
gcgcttgaaggcatcgagccacatctgcgattgattgaaagttataaaaagctgcatagt
gcccgtgcaaaggtggcagctaagtaa
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