Shewanella sp. MR-7: Shewmr7_1056
Help
Entry
Shewmr7_1056 CDS
T00389
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00550
Peptidoglycan biosynthesis
shm01100
Metabolic pathways
shm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shewmr7_1056
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shewmr7_1056
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shm01011
]
Shewmr7_1056
Enzymes [BR:
shm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Shewmr7_1056
Peptidoglycan biosynthesis and degradation proteins [BR:
shm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Shewmr7_1056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ABI42055
UniProt:
Q0HXV0
LinkDB
All DBs
Position
complement(1220114..1221970)
Genome browser
AA seq
618 aa
AA seq
DB search
MSPKKRITMHDHAAEASLFKRRALFTFFCVVALLSVLVTNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEITPDERET
FTEALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYASQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHKGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINSKDYSDLLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESAGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLASATAILANDGRR
FPPHLLKSIKDNTAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgccgaggcgtcactgtttaag
cgccgtgcgctgttcacttttttttgtgttgtcgccctcctgagcgtgttggtgaccaat
ctttatcaccttcaggttgaatcctataaagattacgcaacacgttctaatgacaaccgt
attcgtgtcgtgcccatcgccccaagccgtggcctgatttatgacagaaacggcgtactc
ctcgccgaaaaccaacccttttactccctcgatctggtgcctgagaaaattgccaatatg
tccgaaaccttggacgagctaggcaagttaatcgaaatcaccccagatgagcgcgaaacc
tttaccgaggcattaaagtttcaccgccgctttaagccacttacccttaaaaatcagctg
accgaagaacaagtggcgatttttagcgtgaaccagcatcgctttcccggaatttccgtc
gaggcgggtttaaaacgtaactacccctatgcgagccaactcacccatgtgctgggttat
gtgggcaaaatcaacacccgcgatcgcgcccaattggagcgtaacgatcaatggaaaaac
tatgccgccaccaaggatattggtaagcaaggcattgaaaaattttatgaatctctgctg
cacggcacgccgggtcacctcgaagaagaagtgaacaaccgcggccgaactatccgtacc
cttaaaatcgtaccacctgagccagggcaagatatttacttgactctagatttgcaattg
cagcaaaaggcagtggaattactccaaggccacaaaggctcaatcgttgctatcgacccg
agggacggcggtattttagccctagtatcaagcccaagttacgaccccaaccagttcgtt
caagggattaacagcaaagattacagcgatttattgaacgataaatctcgcccactgatt
aaccgcgccactcaaggtcaatatgcgcccgcatcgacggtcaaacccattattgccctg
ctggggttggatgaaaaagcggttaccgaacacacccgtatttgggaccctggcttttgg
caaatccccggcgttgagcgtaaataccgcgactggaaacgttggggccatggctgggta
aacgtctacagcgccatcgtggaatcctgcgatacctacttctatgagttggcttataaa
atcggtgtcgatcctatcgcccgctttatggagcaattcggctttggacaaaataccggt
gtcgatattttcgaagagtcggcgggcaatatgccgtcgaaggaatggaagcgcttaaaa
tacaatcaagcttggtacattggtgacaccatttctgtcggtatcggccaaggttactgg
accgccacgccattgcaattggccagcgccaccgccattctcgccaacgatggccgccgc
ttcccaccgcatttgttaaagtcgattaaggataatacggctaaaattgactcacccatt
aacgagttaccgccgattgaacttaagaacccgcgcaactggaaaatcatcaacgaagcc
atgcgccaaacggctcataagtctcgcttcaccgacgccagttacacggctgcgatgaaa
accggtacggcgcaggtcattggcgtggccgaaaacactaagtacgatgccaataagatt
gccgagcatttccgcgataacgccctagtcgtcgcctatgcgccctttgaagatcctaaa
atcgtcctcgcggtggtgatggaaaacgccggctggggtggcgcaaacgctggccctgtt
gcccgcgccatgctcgatgaatacatgctaagagacacttggaaaccaacgccatga
DBGET
integrated database retrieval system
