Shewanella sp. MR-7: Shewmr7_1304
Help
Entry
Shewmr7_1304 CDS
T00389
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Shewmr7_1304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_1304
Enzymes [BR:
shm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Shewmr7_1304
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Shewmr7_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABI42303
UniProt:
Q0HX52
LinkDB
All DBs
Position
complement(1510663..1512009)
Genome browser
AA seq
448 aa
AA seq
DB search
MQVPKNNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSAPSSGHWYLTLKDHYSQIRCA
MFKGRNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKL
AAQGLFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGESA
DLNICQAINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVD
TTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSANHYQLKQERRLSLLEH
RLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEKQSPKHKLALET
NRLNYLATRLQDAMQDTLNQSEQRIKYAAHQLETVSPLATLSRGYSITTDANNQIIDNAA
QLSVGDKINTRLRHGQVQSTVTQITDES
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccctaaaaataatatttataccgtctcacgcctcaatggtgaagtcaggcaa
attctcgagggacaactgggaaaagtctggctaaatggtgaaatttccaacttttcagcc
cccagttcgggccattggtatttaacccttaaggatcattattcacaaattcgctgcgct
atgtttaaggggcgcaatcaaagcgtgagctttaaacctgtgaatggtcaacaggtgcta
gtaaaaggcgccatcagcgtgtacgagccgcggggcgactatcaattattgattgaatct
atgctccccgcaggggatggcttactggcgcaacaatttgaagcgctcaaaatgaagctc
gcggcgcagggattatttgctgccgacactaaacgtcaattaccgaaaaatattcaacgt
attggggtcatcacctcccccacgggcgcggcgatccgcgatgtgttgcatgtgcttgcc
cgccgcgacccttctatcgaagtgattatttatcccactcaggtacaaggtgagagcgcg
gatctcaatatctgccaagccatcaatatcgccaaccaacggctcgaggtcgatgtatta
ctgctcacccgcggcggcggctcactcgaagatttatggtgttttaatagtgaagcgctt
gcccatactatttacaacagcgccctacccgttgtcagcgccgtaggccatgaagtcgac
accactatcagtgactatgtggcagatgttcgcgccccgacgccctctgcgggcgcagag
ctactgtctcaggatagcgacaataagagccaacgtttagccacagtactctcgcgcctc
aaacagagcgcgaaccactatcaactcaagcaggaaagacgcttaagtttgctcgaacac
agactgcaacgcttggatcctaaacgcaccctgcagcaatttgagcagcgtttcgatgaa
atgcaattaagactcgaagccgcactttctaacaaattgcacggcttaagtcgccgtcag
cagcaactggcaaatcgcctcgagaagcagtccccaaagcacaaactcgcactcgaaacc
aatcgattgaactatttagcgacacgtttgcaggacgctatgcaagataccctcaaccaa
agcgagcagcggatcaaatacgccgcccatcaattggaaacggtcagtccattagccacc
ttgagccggggttacagcatcaccacagatgcaaataaccaaatcatagacaatgccgcc
cagctgagtgtgggcgataagataaacactcgcctacgccatggacaagtgcagtcgacc
gtgacgcaaataacggatgaaagttaa
DBGET
integrated database retrieval system
