Shewanella sp. ANA-3: Shewana3_1032
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Entry
Shewana3_1032 CDS
T00428
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shn03016
]
Shewana3_1032
Enzymes [BR:
shn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Shewana3_1032
Transfer RNA biogenesis [BR:
shn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shewana3_1032
Prokaryotic type
Shewana3_1032
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABK47267
UniProt:
A0KTZ8
LinkDB
All DBs
Position
1205386..1206339
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AA seq
317 aa
AA seq
DB search
MARRSKGRFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLL
LPMDTAVADFPEVNVPDASAAYLMQGQAVRVSGLVADTLVRITLGTERRFVGIGEMNQDG
LLAPKRLVVLHDQAKAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgttcgaagggccgctttatcgacggtattgtgttgttggacaaagccact
ggcatgagttccaactttgcattacaacgggtaaagcgcttttttaatgccaataaagcg
gggcacacgggggcgctcgatcccttggcaacgggtatgctacctgtgtgtttaggcgaa
gcgactaagttttcgcagcatttgctggattcggataagcgttatctggttaccgcaaaa
ctgggacaacgcacagatactagcgactccgacggtgaagtggtgcagactcgcccgctc
gaattcactgaggcgcagttaatgtccgccttagagcattttcgtggcgatacccagcaa
gtaccctccatgtattcggcgctgaaataccaaggccagcctttgtataagtatgcccgc
gaggggattgaagtgccgcgcgaggcgcgtccaattacggtctttgaactgaacttcatc
ggtctagaaggcgatgagctgaccttagacattcattgttcaaagggcacttatattcgc
actatcatcgatgatttaggtgagatgcttggttgtggcgcccatgtgattatgctgcgt
cgtactcaagtcgcgcattatccctacgacaaaatggtcaccttggagcaactcgaagcc
ttagtcgctaaggcgcaggaagagcagcttgaccctagcagtttgcttgactcgttgctg
ctacctatggataccgctgttgctgactttcctgaggtcaatgtgccagatgcaagcgca
gcttacttaatgcaaggtcaggcggtacgtgtctctggactcgttgcagatacattggtg
cgcattacgttgggcactgagcgtcgtttcgttggaattggcgagatgaaccaagatggc
ttactggcaccaaagcgcttagttgtgctccacgaccaagctaaagcatcttaa
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