Shewanella sp. ANA-3: Shewana3_1674
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Entry
Shewana3_1674 CDS
T00428
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shn01002
]
Shewana3_1674
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shn01011
]
Shewana3_1674
Peptidases and inhibitors [BR:
shn01002
]
Cysteine peptidases
Family C82
Shewana3_1674
Peptidoglycan biosynthesis and degradation proteins [BR:
shn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Shewana3_1674
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABK47907
UniProt:
A0KVT8
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All DBs
Position
complement(1966659..1968341)
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AA seq
560 aa
AA seq
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MMRFKQFKPTLLLLLSLVSASGIASTQQLETLLEPLSIGERAKVDNTQVISAKLLSRVYQ
VRQYQPLWQDRDYAGTMLDVIKSADDEGLSKEDYHYSKLVELYQQLSASNWQDEYRSSVF
EVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDETHLDFDTTLKQLEEHIKAHTVADAIAG
LAPKIEPYHQLKQYLAQYKDLAARYPFSPIPYTEVIKPGSTSPSVQGIATRLTELGYLAA
SAPADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQLVDQIRI
NLERARWLSANLPTNYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVV
VNPTWTVPRSISTEIINHLRKEPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYWF
VQDPGEDNSLGLVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLLS
ANANWSSSTLSSKLSEGKTENLFLDEPLDILIMYWTVTLKDGKIKFYNDVYKRDPVLIEA
LNRPTYEGVLADDGLLNTME
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcttcaaacaattcaaacctaccttactcctgctcctcagtctcgttagcgcg
agcggcattgcttcaacccagcagctagaaactttactcgaacccttatctattggtgaa
cgagccaaggtcgacaatactcaggtcattagtgccaagttgctgtcgcgggtctaccaa
gtgcgtcaatatcagccgctctggcaagacagagactacgcgggcactatgctagatgtg
attaaaagtgccgatgatgaagggttgtcgaaggaagattatcactactccaagctagtc
gaactttaccaacagctcagtgcctcgaattggcaggatgaataccgcagcagtgtattt
gaagtgctactaagcgatgggatcatcacctacgccattcacttgctaaacggcaaagtg
aaccccagtatgctcggcaaaacttggaattatgatgaaacccatctggatttcgatacc
acgttaaagcagctcgaagaacacataaaagcacacactgtggctgatgctattgcaggc
ttagcgcctaagattgagccctatcaccagctaaaacagtatcttgcccagtacaaagac
ttagcggcacgctatccctttagccccattccctatacggaagtcatcaagcccggcagc
acttccccttcggtacaaggcattgctacacggctaacagagttaggttacttagcggca
agcgcgccagcggacaatagcgccgccgtgaaccagcccttaacgtacgacagcacgctt
gaagctgcggtgcgtcaattccaaaccgaccatagtctcaaagccgatggcgtgattggt
gcgggcactatggcggcgctgaatgtgccctactcgcaactggtcgatcagatccgtatt
aacctcgagcgagcgcgctggttatcggcaaacttgcccaccaattatcttatcgtcaac
ttggcaggttacgagctgttactctttaaagacaacagcttaagctggcgaaccgacatt
atcatcggcaaaattaacgctaaaacaccactgtttaaatccaagttaaaatacgtggtc
gttaaccctacttggactgtgccccgcagcatctcgactgaaatcatcaatcacttgcgt
aaagagcccgattatttacagaagaaacactttaaagtggtcgaaggctcgggcacaccc
gtggatgcaagcggcatcgactggcatagcatgacgcgcaaaaacttcccctactggttt
gtgcaagacccgggtgaagataactcactgggattagtgaagtttatcttccctaaccaa
tactcgatttatctacatgatacgccagcaaaaagtctgtttgaacaaacggatagagcc
ttcagtcatggctgtattcgagtcaaagatccgctcgtgctggcggataaattgctgagt
gccaatgccaattggtcaagtagcacgctcagtagcaaattaagtgagggaaaaacggaa
aacctgttcttagatgaacccttagacattttgatcatgtattggaccgtcaccttaaag
gacgggaaaatcaagttttacaatgacgtatataaacgcgatccggtccttatcgaggcg
ttaaaccgcccaacctatgagggtgtgttagccgatgatggcttgctcaacaccatggag
taa
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