Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_5337
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Entry
SHJGH_5337 CDS
T02531
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJGH_5337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_5337
Enzymes [BR:
sho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SHJGH_5337
DNA repair and recombination proteins [BR:
sho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJGH_5337
Prokaryotic type
SHJGH_5337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AGF65000
LinkDB
All DBs
Position
complement(6055728..6056603)
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AA seq
291 aa
AA seq
DB search
MTEKLHAPVIAWFDTHARDLPWRRPEAGPWGVMVSEFMLQQTPVNRVLPVYEEWLARWPR
PADLAKEAPGEAVRAWGRLGYPRRALRLHGAAVAITERHGGDVPTDHAQLLALPGIGEYT
AAAVASFAYGQRHAVLDTNVRRVLARAVTGVQYPPNATTAAERRLARELLPQDERTAARW
AAASMELGALVCTAKNEGCPRCPIAAQCAWRLAGKPEHAGPPRRGQTYAGTDRQVRGKLL
AVLREAHAPVPQAVLDRVWHEPVQRARALDGLVADGLVEPLPGGLYRLPLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaagctgcacgcccccgtgatcgcctggttcgacacccacgcccgtgacctc
ccctggcgccgcccggaggcgggcccctggggcgtgatggtcagcgagttcatgctccag
cagaccccggtgaaccgggtgctgcccgtctacgaggagtggctggcccgctggccgcgc
cccgccgacctggcgaaggaggcgcccggcgaggcggtgcgcgcctggggccggctcggc
tatccgcgccgcgcgctgcgcctgcacggtgccgcggtcgccataacggagcggcacggc
ggtgacgtaccgacggatcacgcgcagctgctcgcgctgcccggcatcggtgagtacacg
gccgccgcggtggcctcgttcgcgtacgggcagcggcacgcggtgctggacaccaatgtg
cgccgggtgctcgcgcgggcggtgaccggggtgcagtacccgccgaacgcgaccacggca
gccgagcggcgcctggcgcgggagctgctgccgcaggacgagcggaccgccgcgcggtgg
gccgccgcctccatggagctgggcgcgctggtgtgcacggcgaagaacgaggggtgcccg
cggtgcccgatcgccgcgcagtgcgcctggcggctcgcgggcaagccggagcacgcgggt
ccgccgcgccgcgggcagacgtacgccggtacggaccggcaggtgcgcggcaagctgctg
gccgtgctgcgggaggcgcacgcgccggtgccgcaggcggtgctggaccgggtgtggcac
gagccggtgcagcgggcgcgggcgctcgacgggctggtcgcggacggtctggtggagccg
cttccgggcggcctctaccggctgccgctcggctga
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