Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_6607
Help
Entry
SHJGH_6607 CDS
T02531
Name
(GenBank) DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
sho
Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHJGH_6607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sho03400
]
SHJGH_6607
Enzymes [BR:
sho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SHJGH_6607
DNA repair and recombination proteins [BR:
sho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHJGH_6607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AGF66270
LinkDB
All DBs
Position
complement(7493140..7493985)
Genome browser
AA seq
281 aa
AA seq
DB search
MPEGDTVWQAARRLHEALAGKALTRSDFRVPKYATVDLTGRGVLNTIPRGKHILTRFEGG
LTLHTHLRMEGAWKVYGTGERWRGGPAYQIRAILGTADRTAVGYRLQVLELLRTTEEERV
VGHLGPDLLGPDWDPERALANVLSDPARELGEALLDQRNLAGIGNVYKSELCFLLGVTPW
LPAGALPADRARQLPALAKRLLETNRDRPVRQTTGLHRYDLFVYGRAPRPCLRCHTPVRV
ADQGDGSEERPTYWCPTCQTGPAPAPGTPQHWRDKYPRRTR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtgacacggtctggcaggccgcgcggcggctgcatgaggctctcgcgggc
aaggcgctgacccgcagcgacttccgcgtgccgaagtacgccacggtcgacctgaccggc
cgcggggtgctgaacacgatcccgcgcggaaagcacatcctcacccggttcgagggcggc
ctcaccctgcacacccacctgcgcatggagggcgcgtggaaggtgtacggcacgggcgag
cgctggcggggcggaccggcgtaccagatccgggcgattctcggcaccgccgaccgtacg
gccgtcggctaccggctacaggtcctggagctgctgcgcacgaccgaggaggagcgggtc
gtcggccacctcggccccgacctgctcggcccggactgggaccccgagcgggccttggcc
aacgtcctgtcggacccggcccgcgagctcggcgaggccctgctggaccagcgcaacctg
gccggcatcggcaacgtctacaagagcgagctgtgcttcctcctcggcgtcaccccctgg
ctgccggccggggcgctccccgcggaccgcgcccggcaactgcccgcgctggccaagcga
ctgctggagaccaaccgcgaccgcccggtccggcagaccaccggcctgcaccggtacgac
ctgttcgtctacggccgcgcaccccgcccgtgcctgcgctgccacacccccgtgcgggtg
gccgaccagggcgacggctccgaggaacgccccacctactggtgccccacctgccagacg
ggccccgcccccgcacccggcacgccccaacactggcgcgacaagtacccgcgccgcacc
cgctga
DBGET
integrated database retrieval system
