Shewanella putrefaciens 200: Sput200_0476
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Entry
Sput200_0476 CDS
T02015
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sput200_0476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shp03400
]
Sput200_0476
Enzymes [BR:
shp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sput200_0476
DNA repair and recombination proteins [BR:
shp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sput200_0476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
PriA-like_WH
PriA_CRR
AAA_30
TrwB_AAD_bind
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADV52962
UniProt:
E6XH68
LinkDB
All DBs
Position
complement(528874..531069)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQNFSYRVPETYPQTPQIGVRVKVPFGRQQLIGLVTAVTNTCSLEPK
QIKAVIDFIDDTPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQYW
QLTELGQNIAPEIVKRAPAQKKLLELLKKTSLTQEEVITFAISKTALKALEDKGWVARHE
KIAELNLDWRTQLVLDETPHRLNKEQAIAVTILNQQQGYHCTLLEGITGSGKTEVYLAVL
EEILKQGKQALILVPEIGLTPQTINRFKRRFKVNVAVLHSGLTDNQRLEAWRQARCGQAA
IIIGTRSALFTPMAYPGMIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPVILGSAT
PSLESLQNALSGRYVHLQLGERAGAAKKVRQGIIDIKNLPLKAGMSAPLLNEIRLHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEICCHHCGNQYAIPKQCHK
CGSTMLMGQGIGTEQLAEALQQEFPKYPVVRIDRDTTRLKGSLENHLSAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPILRDLLHRGYGEFARSQLKERQQALLPPAWHMVLVRAEAHSALDADSFLNAFAA
LLPQDKEFEVIGPMPAPLDRKAGKFRRQLMFQAKNRNRLQQEFERIHPLVELLPEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtttgtcgaagttgcgttacctgtacctatgcggcaaaactttagttaccgc
gttcccgaaacctacccgcaaacaccacaaattggggttcgcgttaaagtgcctttcggt
cgccagcaacttatagggttagtcaccgcggtgactaacacttgtagcctagagccaaag
caaataaaagctgtcattgattttattgatgacacgccactattgccagaatccctttat
aaattaactttatgggcagcaagatattacttttgcagccaagggcaaatgctaactcaa
gccctccctgtcgcattacgtaagggactcgatgccgcaccacaaaaaatccaatattgg
caattaactgaactagggcaaaatattgctcccgagatcgttaaacgcgctcccgcgcag
aaaaaactgctcgagttactcaaaaagactagcctaactcaagaagaagtgatcactttc
gcgataagtaaaaccgccttaaaagccttggaagataaaggttgggttgctcgtcacgaa
aaaatagccgaacttaaccttgattggcgtacccaattagttctggatgaaacaccgcat
agactcaataaagaacaagctattgccgtgactattttaaatcagcaacaaggttatcat
tgcaccttattagaaggtattaccggttcgggtaaaaccgaagtctatttggccgtactc
gaagaaattctaaaacaaggaaagcaggcactgatcttagtgccagagattggcctaacg
ccacaaaccatcaaccgatttaaacgtcgttttaaggtcaatgtcgcggttttacattca
gggttaaccgataaccaacgcctcgaagcatggcgtcaagcacgctgtggacaggcggcg
atcattattggcacacgttcagcgttgttcacacctatggcctaccctgggatgattatt
ctcgatgaagaacacgacagcagtttcaagcagcaagaaggtgtgggctatcatgctcgt
gatttagcggttatgcgtggccatttagaatcaattcccgtcattttaggctctgccaca
ccgtcactcgaaagtctgcaaaatgccttgagtggtcgctatgtgcatttacaacttggt
gagcgcgcaggtgccgccaaaaaagtaagacaaggtattattgatattaaaaatctgccc
ctaaaggcagggatgtcggcaccactattaaatgaaattaggctgcatctagatgcagga
aaccaagtattactgtttttaaaccgccgtggttttgcgccagccctactatgccacgag
tgtgggcacttacacgagtgcgaccgctgcgacgcgtttttcacagtgcatcaatccctt
ggcgaaatttgctgtcaccattgtggtaaccaatatgccattcccaaacaatgtcacaaa
tgcggcagcactatgctgatgggccaagggatcggcacagaacaacttgctgaggcattg
cagcaggagtttccgaaatatcctgtggtgcgcatcgaccgagatacgacgcgtcttaaa
ggctccctcgaaaaccatttaagtgcgattcataagggtgaatataaaatcttagtcggc
actcaaatgttagcaaaaggacaccatttccccgatgtaaccctcgttggattgctcgat
gtcgatggggccctatttagcgccgacttccgcgcacctgagcgttttgggcaactctat
actcaagtcgcagggcgtgcgggccgcgccagtaaacccggcacagtgctactacaaaca
caccagagtgataaccccatcttgcgggatttgctgcaccgcggttatggcgagtttgcc
cgtagccagttaaaagaacgccaacaggcactactgccaccagcatggcatatggtactc
gtacgcgccgaagcgcattctgccttggatgccgacagttttctcaatgcctttgcagca
cttttacctcaagataaagagtttgaggtaataggcccaatgcctgcgccactggataga
aaagcaggtaagttccgccgccagttaatgtttcaggccaagaatcgcaatcgcctgcag
caagagtttgaacgtattcatccgcttgtggagttactccccgaagcaaagcgttgccgc
tggagtttggatagggatccacaggatctgttataa
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