Shewanella putrefaciens 200: Sput200_0825
Help
Entry
Sput200_0825 CDS
T02015
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
shp
Shewanella putrefaciens 200
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shp03009
]
Sput200_0825
03016 Transfer RNA biogenesis [BR:
shp03016
]
Sput200_0825
Enzymes [BR:
shp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Sput200_0825
5.4.99.29 23S rRNA pseudouridine746 synthase
Sput200_0825
Ribosome biogenesis [BR:
shp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sput200_0825
Transfer RNA biogenesis [BR:
shp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sput200_0825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADV53304
UniProt:
E6XL47
LinkDB
All DBs
Position
complement(919112..919789)
Genome browser
AA seq
225 aa
AA seq
DB search
MTDFIYQPPTTPWLEILYQDKDIIVINKPSGLLSVPGRDPAHYDSVYARVKAEHPHCQIV
HRLDMATSGVIVLALIRSAERELKRQFHDRETSKTYIARVAGHIKHDTGSIDYPLICDWP
NRPKQKVDHFVGKPSLTHYQVMSRAKRSTLVKLTPITGRSHQLRVHMMAIGHPILGDGFY
ADPLAKSLAPRLLLHAAELTIKHPYTGVSMTFSAEAPFCEPLGEQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttatttatcaaccacccacaacaccttggcttgagattctttatcaagat
aaagatattatcgtgattaacaaaccttcaggattgttgtctgtgccaggtcgagatcca
gcccattacgatagtgtttatgcccgcgtaaaagccgaacacccccattgccaaatcgtg
catcgtctcgatatggcaacctcgggcgtgatagtcctcgcccttattcgcagtgctgaa
cgagaactaaaacgtcaattccacgatagagaaaccagtaaaacgtatattgcacgggtt
gcaggccatataaagcacgacacaggtagtattgactatccacttatctgcgattggcca
aatagacccaaacaaaaagtcgatcattttgtcggtaaaccttcgctcactcactatcaa
gttatgagtcgagccaaacgttcaacactcgttaaactcaccccaatcacgggccgctca
catcaattacgggtgcatatgatggcaataggccatcctattttaggtgacggtttttat
gccgatccactcgctaaatcattagccccacgcctattactccatgcggcagagctcacc
atcaaacatccctacacaggtgttagcatgacttttagcgctgaagccccgttttgtgag
cctttgggtgaacaatga
DBGET
integrated database retrieval system
