Shewanella putrefaciens 200: Sput200_1372
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Entry
Sput200_1372 CDS
T02015
Name
(GenBank) Ribonuclease H
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sput200_1372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shp03032
]
Sput200_1372
Enzymes [BR:
shp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
Sput200_1372
DNA replication proteins [BR:
shp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
Sput200_1372
Elongation factors (archaeal)
Sput200_1372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
ADV53841
UniProt:
E6XR84
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All DBs
Position
1548463..1549092
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AA seq
209 aa
AA seq
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MAVFKVLTPADIVAFSTGLIAGVDEVGRGPLVGDVVTAAVILDPNQSISGLNDSKKLSEK
RREALFDEICEKALCYHIGRASPAEIDELNILHATMLAMQRAVAGLNLAPKLVLVDGNRS
PVFSHNSQSIVSHSIIKGDGLIASISAASIIAKVTRDREMDALDAVYPQYGFAKHKGYPT
KAHFEAIAEHGVFDQYRKSFKPVKALLEG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctttaaagtgctaactccggccgatattgtggctttttcgacaggactgatt
gctggggttgatgaagtgggccgtggccccttggtcggcgatgttgtgactgcggccgtg
atcctcgacccaaatcagtccatcagtggactcaatgattcgaaaaaactcagtgagaag
cgccgcgaagccctgtttgatgagatttgtgaaaaagccctgtgttatcacatcggccgt
gcaagtcctgctgaaatcgatgaacttaatattttgcatgccactatgcttgccatgcag
cgcgccgttgctgggcttaatctcgcgcctaaactcgtgttagtggatggtaatcgcagc
ccagtttttagccataatagtcagtcaattgtcagtcatagcatcattaaaggagatggt
cttatcgctagtatcagtgcggcgtcgattattgccaaagtgacccgagatcgtgagatg
gacgcgcttgatgccgtttatccgcaatatggttttgctaagcataagggctacccgact
aaggcacatttcgaggccatcgctgagcatggtgtattcgaccaataccgtaaaagtttt
aaacccgtcaaggcattactcgagggctaa
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