Shewanella putrefaciens 200: Sput200_2186
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Entry
Sput200_2186 CDS
T02015
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
shp
Shewanella putrefaciens 200
Pathway
shp00020
Citrate cycle (TCA cycle)
shp00620
Pyruvate metabolism
shp01100
Metabolic pathways
shp01110
Biosynthesis of secondary metabolites
shp01120
Microbial metabolism in diverse environments
shp01200
Carbon metabolism
Module
shp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sput200_2186
00620 Pyruvate metabolism
Sput200_2186
Enzymes [BR:
shp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Sput200_2186
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ADV54637
UniProt:
E6XN47
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All DBs
Position
complement(2494184..2495728)
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AA seq
514 aa
AA seq
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MSSHPKMSENAVIKQADFIESVADALQYISYYHPKDFVDAMSEAYEREQSAAAKDAIAQI
LINSRMSAEGKRPLCQDTGIVTTFVKVGMGVKWDKTDMTIQEMVDEGVRRAYTNPDNPLR
ASIVSDPAGSRKNTKDNTPSVVHIDMVPGNHIEVAIAAKGGGSENKAKMVMLNPSDDIAA
WVEKTLPTMGAGWCPPGMLGIGIGGTAEKAAVLAKEALMESVDIHELLARGAQTTEEKLR
LDIFERANNLGIGAQGLGGLTTVLDVKIKTAPTHAASKPVVMIPNCAATRHVHFHLDGSG
PADLTPPSLADWPEITREVGDDVRRVNLDTVTQADIEQWQSGETILLSGKMLTGRDAAHK
RIQSLIESGEGLPEGVDFTGKFIYYVGPVDPVGTEVVGPAGPTTATRMDKFTDLMLEKTG
LMGMIGKAERGPATVESIKKHKAVYLMAVGGAAYLVSKAIKHSRVVAFADLGMEAIYEFD
VQDMPVTVAVDSHGVNAHETGPAIWKVNIANAKA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaccctaaaatgtctgaaaatgctgttattaaacaagccgactttattgaa
agtgtggcggatgccctgcaatacatttcttattaccacccaaaggattttgttgatgcc
atgagcgaagcttatgagcgtgaacaaagtgcggcggcgaaggatgcgattgcccagatc
ttaattaactcgcgtatgtcggccgaaggtaagcgtcctttgtgtcaagacacggggatt
gtgaccacgtttgtaaaagtgggtatgggtgtaaagtgggacaaaaccgatatgacgatt
caggaaatggtcgacgaaggtgttcgtcgtgcctataccaatcctgataacccactgcgc
gcatcgatagtgtctgatcctgcgggcagccgtaaaaataccaaagataacaccccatct
gtggtgcatatcgacatggtgcctggtaaccacatcgaagtggcgattgcagccaaaggc
ggcggcagtgaaaacaaagctaagatggtgatgttaaacccatctgacgatatcgctgct
tgggtagaaaaaacgctaccgaccatgggcgcaggctggtgtcctccgggaatgctaggc
ataggtatcggtggcacggcagaaaaagcggccgtattagccaaagaagcgctgatggaa
agcgtggatatccatgagttgctcgcgcgtggcgcccaaacgaccgaagaaaagctgcgt
ttagacatttttgagcgtgcgaataatttaggcataggtgcgcagggtcttggcggttta
accacagtgttagatgtgaaaatcaaaacagcgccaacccacgcggcctcaaaacctgtg
gtgatgatccccaactgcgcggccactcgccatgttcattttcatttagacggctcgggt
cctgcggatctcacgccgccatcattagccgattggccagaaattacccgtgaagtgggt
gatgatgtgcgccgtgttaacttagatactgtcactcaagcggatatcgagcagtggcaa
agcggtgaaactattctgctcagcggtaaaatgttgactggtcgtgatgctgctcataaa
cgcattcaaagcctgattgaaagcggtgaaggtctgccagaaggcgtggactttaccggt
aagtttatttactacgttggcccagttgatcccgttggcactgaagttgtcggtcctgcg
ggcccaaccactgcaactcgtatggataaattcactgacttaatgttagagaaaacgggc
ttgatgggcatgataggtaaagctgagcgcggccctgcgacagttgaatcgatcaaaaaa
cataaagcggtatatctaatggccgttggaggcgctgcgtatttagtgtctaaagcgatt
aaacattctcgcgtcgtggcctttgccgatttaggaatggaagcgatttacgagtttgac
gtgcaagatatgccagtgactgtggcagtggattcacatggcgtgaacgcccatgaaacg
ggtcctgcgatttggaaagtgaatatcgccaacgcgaaagcgtaa
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